KEGG   Vibrio sp. sp1: H9L11_22560
Entry
H9L11_22560       CDS       T11103                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
vip  Vibrio sp. sp1
Brite
KEGG Orthology (KO) [BR:vip00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vip02044]
    H9L11_22560 (tssC)
Secretion system [BR:vip02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H9L11_22560 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 DUF7236
Other DBs
NCBI-ProteinID: QRZ24636
LinkDB
Position
2:complement(1606790..1608265)
AA seq 491 aa
MSAEAQAPEQEAALVESGSLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTEKV
DQSLVDLMISEIDQKLSKQVDAILHNEEVQAIESTWRGLKYLVDHTDFRENIQIELISAK
KDEVLDDFEDAPEVVKSGLYKQIYTREYGQFGGKPVGAVICDYAMSASSPDIKLMEYMAN
VGAMSHAPFITSASAKFFGLDSYEELPNLKDLKSVFEGPQYAKWRGLREHEDARYLGLCT
SRFMLRTPYSVEDNPIKAFDYDEQVTDSHDNYLWGNSAYAMASKISESFAKYRWCPNIIG
PQSGGTVQDLPVYNFEAMGQIETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFS
ANSVQKPKVFANTPEGKQAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLE
IELNKWIRQYVSDQENPPAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGAS
FDLSLVGKLDQ
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgtctgcagaagcacaagcgccagaacaagaagcagccttagttgaatcaggctcactt
ctggatagcattcttaacgaaacacgtttaaagccaagtgatgaaggttttgacgttgca
aaacgcggcgtagaagcattcatcagtgagctactaagcagttcgaacacagagaaagtc
gaccaatctctggttgatctgatgatctctgaaatcgaccaaaaattgtctaagcaagtt
gatgcaattcttcacaacgaagaagttcaagcgattgaatcaacgtggcgtggccttaag
tacctggttgatcacactgacttccgcgagaacattcaaattgaactgatctctgcgaag
aaagacgaagttcttgatgacttcgaagacgctccagaggtggtgaagtctggcctgtac
aagcaaatctacacacgtgaatacggccagttcggtggtaaacctgttggcgccgtcatt
tgtgattacgctatgtctgcctcttcgcctgacatcaaactgatggaatacatggcgaac
gtaggcgcaatgtctcacgcaccattcatcacgtcggcatcggctaaattctttggccta
gacagctatgaagagctgccaaacctaaaagatctgaagtctgtattcgaaggtccacag
tacgcgaaatggcgtggtctgcgtgagcacgaagatgcacgttacctaggtctatgtacg
tctcgctttatgttacgtacgccttactctgtagaagataacccaattaaggcgtttgac
tacgatgagcaagtgacagacagccatgataactacctatggggcaactcagcgtacgcg
atggcgtctaagatcagtgaatcatttgctaagtaccgttggtgtccgaacattattggt
cctcaaagcggtggtactgtacaagatctaccggtttacaactttgaagctatgggtcaa
atcgagactaagatcccaaccgagatcctggtttctgaccgtcgtgagtatgagctagca
gaagaaggcttcattgcgctaaccatgcgtaaaggttctgacaacgcggcgttcttctct
gcaaactctgttcaaaagccgaaagtgtttgcgaatacgccggaaggcaaacaagccgag
atgaactacaagctaggtactcagcttccttacatgttcattatcaaccgtttagcgcac
tacatcaaagtgctacagcgtgagcaaattggctcttggaaagagcgttctgacctagaa
atcgaattgaacaagtggattcgtcaatacgtttctgaccaagagaacccgccagcggaa
gttcgtggtcgccgtccgcttcgtgctgcgaaggttgaagtatcagacgtagaaggcgat
ccaggctggtacaaagtatcgatgtctgtacgtcctcacttcaagtacatgggcgcaagc
ttcgacttgtctctagttggtaagctagaccaataa

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