Vibrio sp. B1Z05: QV280_00210
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Entry
QV280_00210 CDS
T11544
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
viq Vibrio sp. B1Z05
Pathway
viq00300
Lysine biosynthesis
viq00470
D-Amino acid metabolism
viq01100
Metabolic pathways
viq01110
Biosynthesis of secondary metabolites
viq01120
Microbial metabolism in diverse environments
viq01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
viq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QV280_00210 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QV280_00210 (dapF)
Enzymes [BR:
viq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QV280_00210 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
RGM_C
Motif
Other DBs
NCBI-ProteinID:
YAW58758
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All DBs
Position
1:46978..47808
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNIFFSPELIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVSMKGLTNKYSIRVSTKKGKMLLKLADDEQVRVNM
GIPEFEPSKIPFKAKQKEKTYILRVGQHTLFCGSVSMGNPHVVTVVDDVATAKVEELGPL
LESHERFPERVNVGFMQIVDRNKIALRVYERGAGETQACGSGACAAVAVGILQGALNEHV
EVSLTGGKLKIEWAGPGQPLFMTGSATHVFDGQISC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccatttttctaaaatgcacggactaggcaacgactttatggttgttgactgt
atcactcaaaatatttttttctcgccggagctgatacgtcgtcttgctgatcgccacaca
ggagttggttttgaccaactcttagttgtagaagcaccttatgatccagaaaccgacttc
cactaccgaattttcaatgccgatggttcagaagtagaacagtgtggcaacggcgcgcgc
tgttttgctcgttttgtttccatgaaaggcttaactaataagtacagcatccgtgtcagt
actaaaaaagggaaaatgctgcttaaattagccgatgatgagcaagttcgagtcaacatg
ggcataccagagtttgagccaagtaagattccttttaaggctaagcaaaaagagaaaacg
tatatattacgagtaggtcaacacaccttgttctgtggctctgtaagcatgggcaacccg
catgtcgtaaccgtagtagatgatgttgcaacggctaaagtagaagagctaggtccgcta
ctggaatcgcatgagcgtttccctgagcgagtgaatgtaggctttatgcaaattgtcgat
cgcaacaaaattgctctgcgagtttacgaacgtggcgcaggtgaaacccaagcttgtggt
agcggtgcgtgtgctgcggttgcggttggtattctgcaaggcgctttaaatgaacatgtt
gaagtgagcttaactggcggaaaactaaaaattgaatgggcagggccaggacagccattg
ttcatgactggtagcgctacgcatgtctttgatggacagattagctgttaa
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