Vibrio sp. B1Z05: QV280_01670
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Entry
QV280_01670 CDS
T11544
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
viq Vibrio sp. B1Z05
Brite
KEGG Orthology (KO) [BR:
viq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
viq03019
]
QV280_01670 (rng)
03009 Ribosome biogenesis [BR:
viq03009
]
QV280_01670 (rng)
Messenger RNA biogenesis [BR:
viq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QV280_01670 (rng)
Ribosome biogenesis [BR:
viq03009
]
Prokaryotic type
rRNA processing factors
QV280_01670 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
YAW57888
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All DBs
Position
1:345012..346481
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AA seq
489 aa
AA seq
DB search
MSAELLINSTPSETRVAMIEGGVLQEVHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIVPHTECVAENEKQQFKVRDISELVRQGQDIVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESEKERNRLKKIVAPYCSESGGFIIRTAAEGADEK
ELAQDAAFLERLWEKVMVRRSKYITRSTLYGELGLAPRILRDFVGTELSLIQVDSRMVFE
SLLEFTEEFVPELMDKLVLYDGDKPIFDLYDAESEIQRSLDRRVNLKSGGSLIIDQTEAM
TTVDINTGAFVGRRNLEETIFNTNLEATEAIARQLRLRNLGGIIIIDFIDMISDEHRKRV
LASLEAALNNDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSDCPSCEGRGAVKTVETV
CYEVLREITRVNRAYDADRFLVYASLAVADALQGEESHALAELELFIGKEVKITAEPLYV
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagagttattgatcaactcaacaccgagtgaaactcgggttgctatgattgaa
ggcggtgtccttcaagaagttcatatagaaagggaagcgagacgaggcattgtaggcaat
atttacaaaggtcgagtcagccgtgtattaccagggatgcaagctgcgtttgttgatatt
ggtttggataaagcggcctttctacatgcttcagatattgtgcctcatactgagtgcgtt
gccgaaaacgaaaaacagcaatttaaagtgcgtgatatttctgaactggttcgccaaggt
caagatatcgtggtgcaagtggttaaagatccccttggcacgaaaggcgcccgtttaacc
accgatattactcttccttctcgttatttagtcttcatgcctggtgcaagccacgttggc
gtatcacaacgtatcgaatcagaaaaagagcgcaatcgtcttaaaaaaatcgtcgcccct
tattgcagtgaatccggcggatttattattcgaacggctgctgaaggcgcggatgaaaaa
gagctggctcaagatgcggcttttttagagcgcttgtgggagaaggtgatggttcgccgc
tccaaatacattacccgttcaacactatacggagagctagggcttgctccgcgaatttta
cgtgactttgtcggtactgaattgtctttaattcaggtcgattcacgtatggtgtttgaa
tcattgcttgagtttaccgaagagtttgtccctgaattaatggacaaactggtgttgtat
gatggtgataaacctatttttgatttatacgatgccgagagcgaaattcaacgctcactt
gatcgtcgagtcaatttaaaatcaggtggctcgctgatcatagatcagacagaagcaatg
acgacggtagatattaataccggagcctttgtcggtcgtcgtaatttagaagaaaccatt
tttaatactaacctcgaagcaaccgaagctattgctcgtcaacttaggttacgtaacttg
ggtggcatcatcattatagatttcatcgatatgatcagtgatgagcaccgcaagcgtgtg
cttgcttcacttgaagcggctttaaacaatgaccgcgttaaaactaatatcaatggtttt
actcaattaggattagttgagatgacacgtaagcgcactcgagaaagtattgagcacgta
ttgtgttcagattgccctagctgtgaaggccgaggcgcagtaaaaaccgttgaaactgta
tgttatgaagtgcttcgtgaaatcacacgagttaatcgtgcttacgatgcggaccgattc
ttagtttatgcttcattggcggttgcggatgcattgcaaggtgaagaatctcacgcatta
gccgagttagaactgtttataggtaaagaagttaaaatcacagccgaaccgctttatgtt
caagagcagttcgatgttgtaatgatgtag
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