Virgibacillus sp. SK37: X953_00055
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Entry
X953_00055 CDS
T03219
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vir
Virgibacillus sp. SK37
Pathway
vir00550
Peptidoglycan biosynthesis
vir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
X953_00055
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vir01002
]
X953_00055
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vir01011
]
X953_00055
Enzymes [BR:
vir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
X953_00055
Peptidases and inhibitors [BR:
vir01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
X953_00055
Peptidoglycan biosynthesis and degradation proteins [BR:
vir01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
X953_00055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
CBM87_Agd3
Motif
Other DBs
NCBI-ProteinID:
AIF41938
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All DBs
Position
14057..15391
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AA seq
444 aa
AA seq
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MKHNLRKGLSFILAVMVAMITVMVQPFSTKAAETLDIEADSAILVDVETGKILYAKNADV
ALPPASMTKMMTEYLVWEAIEKGDISWDTTTQISDYPYSISANTSFSGVGLKQSQDYTVK
DLYKAMAINSDNATTIALAELIAGSEGEFVKMMNKKGKEMGLPDFKFVNSTGLDNKSLGD
NYPEGTDPNATNLLSAESAALLAYKLIKDYPEALDISSIPVTDFGGQEIRNWNHMLAHDT
TFLKQFFYEGVDGLKTGYTDLAGYCFTGTAERNGNRLISVVMKTGSEEKRFQETAKLLDY
GFSKFETKELFPEGYQLKDETTLPVAKGKEEKVSISTNKAVTIPVKSGQEKQYSIKYNLD
KDKLNKEGELLAPVKKGEKVGTAEVVFKGDKDYGYITKDKGNTIDLVTNEAVEKSNWFML
TLGAIGDFFVDLFTTVVDWIKGLF
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacacaatttaagaaaagggttatcattcatacttgcagttatggtagcaatgata
acagtaatggttcagccattttcgacaaaagcagcagagacattggacatcgaagcagat
tccgccattttagttgatgtggaaacaggtaaaattttgtatgcaaaaaatgcggacgta
gcacttcctccagctagtatgacgaaaatgatgacagaatatttagtgtgggaagcaatt
gagaaaggcgacatatcatgggatactacaacacaaatcagtgattatccatacagtatt
tctgcaaatacttctttctctggagtaggcttaaagcagagccaggattatactgtaaaa
gatttatataaagcgatggcaattaattctgacaatgcaacaacaattgcgcttgctgag
ttaatagcgggatctgaaggcgaatttgttaaaatgatgaataaaaaaggtaaggaaatg
ggcttgcctgattttaaatttgttaactcgacaggattggataacaaatctctaggtgat
aattatccagaaggtacagatcctaatgcaaccaatttattatcagctgaatcagctgca
ttgcttgcgtataagcttattaaggattatccggaggctttggatatttccagtattcct
gtaactgattttggtggtcaggaaatacgtaactggaaccatatgttggcacatgatact
acttttttaaagcagtttttctatgaaggtgttgacggcctgaaaaccggttataccgat
ttagcaggatactgttttacggggacagcagaacgtaacggcaaccgtttgatctctgtt
gtgatgaaaacaggaagtgaagaaaaacgattccaggaaacagccaagctattggattat
ggtttttctaaatttgaaaccaaggagctatttccagaaggatatcagttaaaagatgag
actaccttacctgttgccaaaggtaaagaagaaaaagtgagtatttctacaaataaagct
gttactattccggttaaatcaggccaggaaaaacaatatagtatcaaatataatcttgat
aaagataagctaaataaagaaggagaacttctggcacctgtcaagaaaggtgaaaaggta
ggtactgctgaagtagtctttaaaggagataaggactatggatatattaccaaagataaa
ggcaataccattgatttagttacaaatgaagctgttgagaagtcaaactggtttatgcta
actttaggtgcaattggcgatttctttgttgatttatttacaactgtcgttgattggatt
aaagggttattttaa
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