Virgibacillus sp. SK37: X953_00195
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Entry
X953_00195 CDS
T03219
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vir
Virgibacillus sp. SK37
Pathway
vir03030
DNA replication
vir03430
Mismatch repair
vir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X953_00195
03430 Mismatch repair
X953_00195
03440 Homologous recombination
X953_00195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vir03032
]
X953_00195
03400 DNA repair and recombination proteins [BR:
vir03400
]
X953_00195
Enzymes [BR:
vir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X953_00195
DNA replication proteins [BR:
vir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X953_00195
DNA repair and recombination proteins [BR:
vir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X953_00195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
DnaX_C
RuvB_N
AAA_30
AAA_22
TIP49
AAA_19
AAA_5
PIF1
RCF1-5-like_lid
AAA_assoc_2
AAA_16
Mg_chelatase
AAA_24
AAA_14
DNA_pol3_delta_C
AAA_2
Hydant_A_N
AAA_7
RNA_helicase
DUF7222
Motif
Other DBs
NCBI-ProteinID:
AIF41961
UniProt:
A0A075JIM0
LinkDB
All DBs
Position
39393..41081
Genome browser
AA seq
562 aa
AA seq
DB search
MSYQALYRVWRPRKFQDVVGQTHITRTLQNAIIQGKFSHAYLFSGPRGTGKTSAAKIFAK
TINCEHAPVKEPCNECAACRGIQDGSISDVIEIDAASNTSVDDIREIRDKVKYASSVVPY
KVYIIDEVHMISVNAFNALLKTLEEPPKHVVFILATTEPHKIPLTILSRCQRFDFKPISN
QAIVERMQTIIGTENISVSPEALETVALAAEGGMRDALSILDQAISYSEESVELEDVLAV
TGGVSQQILNRIVKAMFEKNVEDALQLLDELIQNGKDPGRFVYDMIYFMRDLLLFKSAPD
LEGLLERARVEEEFTQLADIISIDWVQQAIMQLNQCQQEIKWTNSPKIFIEITILSLTNR
VQKEEAPSESGDTEMVSKLTSRLATLEKELTMLKENPVVQSQPVPQRETRRAPARSSKNG
FKIPYDRIREALKQAGKPALKNVQSHWADFLSKLKTTNAPAHATIQDSKPAAASDEILIV
AFKYEIHCSLFMDNRETVESVLETVMGKKLTIIPIPDKAWTELRAEYINKQEKPSESEQE
QADPLIEEARKLVGDDLLEIHD
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagctttataccgcgtttggcgtcctagaaaattccaggatgtcgttgga
caaacacatattacccgaacattgcaaaatgcaattatccaagggaaattttcacatgcc
tatttattctccggtccaagagggacggggaaaacgagtgctgcgaaaatttttgcgaag
acgattaattgtgaacatgcaccagtaaaagaaccatgcaatgaatgtgcggcatgccgg
ggtattcaggatggttctatttcagatgtaatcgagattgatgcagcttccaataccagt
gtcgatgacattcgcgaaattagggacaaggtgaaatatgcatctagtgttgttccttac
aaagtatatattattgacgaagtgcatatgatttctgttaatgcatttaatgcattgcta
aaaaccttggaagagccaccaaagcatgtagtatttattcttgctacaacggagccgcac
aagatcccattaaccattctttccaggtgtcaacgttttgattttaagccaatttccaat
caggcaatagtcgagcgtatgcaaacgattattggtacagaaaatatttctgtttcacct
gaagctctggagacagtagctttggctgctgaaggcgggatgcgtgatgcattaagcatt
ttagaccaagccatctcttatagtgaggaatcggtcgaattagaggatgtattggctgtt
actggcggagtctcacaacaaattcttaatcgcattgtaaaggcaatgttcgaaaagaat
gtagaagatgcattacaattacttgatgaactgatccaaaatggtaaagacccgggtcga
tttgtttatgacatgatttactttatgcgcgatttactacttttcaagagtgcaccagat
cttgaagggttacttgaacgtgcccgagtggaagaggaatttactcagctggctgacata
atttccattgattgggtccaacaggccattatgcaattaaatcagtgccaacaggaaata
aaatggaccaacagtccgaaaatatttatagaaataactattttaagtcttacaaataga
gttcaaaaagaagaagcaccttcagaatccggcgacacagaaatggtttctaaacttact
tcaagattagctacactggagaaagagctgaccatgttaaaggaaaatccggtggttcag
tcgcaacctgtcccacagcgagagacaagaagagcgcctgcccgatcttcaaaaaatggt
tttaaaattccatatgatcgcatacgggaagcgttaaaacaagctggaaaaccagcatta
aaaaatgtgcaatcccactgggctgattttctaagtaaattaaaaacgacaaatgcacct
gcacatgctacaatacaggatagtaaaccagcagcagcttcagatgaaatattaattgtg
gcatttaaatatgagatacattgctccttatttatggataacagggagacggtagaatct
gtgttggaaacagtgatgggaaaaaaattaacgattattcctatccctgataaagcttgg
acagaattaagagctgaatatattaataaacaagaaaaaccttcagaatctgaacaagag
caagcagatccattaattgaagaagcacgtaagcttgttggtgatgatttgttagaaata
catgattaa
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