Virgibacillus sp. SK37: X953_00560
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Entry
X953_00560 CDS
T03219
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vir
Virgibacillus sp. SK37
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vir03400
]
X953_00560
DNA repair and recombination proteins [BR:
vir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
X953_00560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
Rad51
nSTAND_NTPase5
NTPase_1
DUF7125
AAA_22
AAA_16
AAA
NACHT
nSTAND3
AAA_5
AAA_30
AAA_14
AAA_24
KTI12
SLFN-g3_helicase
GvpD_P-loop
ATPase_2
Glyco_transf_N
ABC_tran
TIP49
NPHP3_N
RecA_N
Isochorismatase
TK
Elong_Iki1
ATP-synt_ab
KdpD
MCM
DAP3
AAA_19
zf-RING_10
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AIF42024
LinkDB
All DBs
Position
109942..111315
Genome browser
AA seq
457 aa
AA seq
DB search
MAKRKTKYVCQECGYESAKWMGKCPGCNNWNTLVEEVAATGGRGNHTFNVGGKPAGKPES
ITSIESQKEPRITTTMKEFNRVLGGGIVLGSLVLIGGDPGIGKSTLLLQISSQLAEKQLP
VLYISGEESTRQTKLRADRLGIKADQLYVLAETNLFDIAKQIEEVKPSLVVVDSIQTVYR
EEVTSAPGSVSQVRESTSELMKIAKTNGIPIFIVGHVTKEGAIAGPRLLEHMVDAVLYFE
GERHHTYRILRGVKNRFGSTNEMGIFEMKEEGLREVMNPSEIFLEERSQGAAGSTVVASM
EGTRPVLVEIQALISPSAFGNPRRMATGIDNNRVPLLMAVLEKRVGLMLQNQDAYIKVAG
GVKLDEPAIDLAVAVSIASSFRDQPTNPEDIFVGEVGLTGEIRRVSRIEQRVQEAAKLGF
KRVICPKNNLEGWTIPKNIEVIGVSTVQEALDIGVSR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaagaaaaacaaagtatgtatgtcaagaatgtggatatgaatcagctaaatgg
atggggaaatgccccggatgtaacaactggaatacgttagtagaagaagttgcagcaact
ggtgggcgaggtaaccatacattcaatgttggtgggaaacctgcagggaagccggaaagt
attacttccattgaatcacaaaaggaaccgagaattactacaacgatgaaagaatttaac
cgggttcttgggggcggaattgttctaggctctcttgtattaattggcggggatccgggg
attgggaaatctaccttgttacttcagatttcttcccaattggcagagaagcaattacca
gttctttatatatcgggtgaagaatctacaaggcaaacaaagttacgcgccgatcggtta
ggcattaaggctgatcagctctatgtccttgctgaaacaaatttattcgatattgccaag
cagattgaagaagtaaagccttctctggttgttgtcgattcgatacaaacagtttatcga
gaagaggtaacaagcgcaccgggaagtgtttcacaagttcgagaatctacaagtgaattg
atgaaaatagcaaaaacaaatggaataccaatttttattgttggccatgttacaaaggag
ggcgctattgccggcccacgcttattggaacatatggttgacgccgttctttattttgag
ggggaacgacaccatacgtatcgtattctgagaggtgtaaaaaatcgtttcggaagtacg
aatgaaatgggaatctttgaaatgaaagaagaagggcttcgtgaggtaatgaatccttct
gaaatctttcttgaagaaagatctcaaggagctgctggatctaccgttgtagcctccatg
gagggaacgagacctgtactggtagagattcaggctttaatatctccatccgcctttggt
aacccaaggaggatggctactggcattgataataaccgcgtacctttattaatggctgta
ctggaaaaaagagtagggctgatgttacaaaatcaggatgcatatataaaagtagctgga
ggggttaaattagatgaaccggctattgacttggcagttgcagtgagtattgcttcaagc
tttagggatcaacccacaaatcctgaagatatatttgttggtgaagtaggcttaactggt
gaaataagaagagtttcccgtattgaacaacgagtccaagaagctgcaaaactaggattt
aaacgtgtaatatgcccgaaaaataatcttgagggctggacaataccaaagaatattgaa
gtaataggtgttagtacggttcaggaagcattggatataggggttagcagatag
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