Virgibacillus sp. SK37: X953_00845
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Entry
X953_00845 CDS
T03219
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vir
Virgibacillus sp. SK37
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vir03016
]
X953_00845
Enzymes [BR:
vir01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
X953_00845
Transfer RNA biogenesis [BR:
vir03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
X953_00845
Prokaryotic type
X953_00845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF1125
Motif
Other DBs
NCBI-ProteinID:
AIF42080
UniProt:
A0A075JK28
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Position
155730..156482
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AA seq
250 aa
AA seq
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MARLKCKITYDGSQFAGFQIQPRKRTIQGELEKALTKMHKGLPIRIQASGRTDTGVHAKG
QVIHFDSDYDIPTVNWQKALNTLLPDDLYVKEVEMVPDTFHARYDVTEKEYHYYVLNIKE
PDVFKRNYAYHFPYKLDVVEMQRACEYLEGFHDFTTFSSAKATTKGSKERMMFQVSCEKR
GNEIEFIFRGSGFLYNMVRIIVGVLLDIGQGRRSPEDIEKLLEKKDRQLVGETVPPQGLY
LWQVTYNNSK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggctagattgaaatgcaaaattacttacgatggttcccaatttgcgggttttcagatc
cagccgaggaagagaacgattcaaggtgaattggagaaggctttaactaaaatgcataaa
ggattacctatccgtattcaggcttcaggaagaacggatacaggtgttcatgcgaaaggt
caagtgattcactttgactcagactacgatatcccaacagttaactggcaaaaggcatta
aacaccttattaccagatgatttgtatgttaaagaagtagaaatggttccagatacgttt
cacgctcgttatgatgtaacggagaaggaatatcattattatgtattaaacataaaggaa
ccagatgtatttaagcgaaactatgcctatcacttcccatataagttagatgttgtggaa
atgcagcgagcctgtgaatatttagaagggtttcatgactttactaccttttcctcagct
aaggctactacaaagggaagtaaagaacgaatgatgtttcaggtaagttgtgaaaaacga
ggaaatgaaatcgaatttatttttcggggaagcggatttttatacaatatggtgcgaatt
atcgtaggtgtattattggatattggccaaggtagaagaagtccggaagatattgaaaaa
ttgttagaaaagaaggatagacagcttgtgggagaaaccgttccaccccaaggtttatat
ttatggcaggtaacctataataacagtaaataa
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