Virgibacillus sp. SK37: X953_03050
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Entry
X953_03050 CDS
T03219
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
vir
Virgibacillus sp. SK37
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vir03021
]
X953_03050
Transcription machinery [BR:
vir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
X953_03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
GerE
RE_TdeIII
DUF134
HTH_23
TnsD
HTH_28
HTH_3
Sigma70_ECF
HTH_37
IF2_N
ELMO_ARM
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AIF42392
UniProt:
A0A075JLX0
LinkDB
All DBs
Position
552885..553676
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AA seq
263 aa
AA seq
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MTTKSQPHNSGRDEVYQWIEYLQEEPTDEVVQEKIVLTYKDLVESIARKYSKNSAIHEDL
VQVGMIGLLAAVRRYDASFGKSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIK
KAVDELTTANQVSPSIKEIADYLEVTEEDVLETMEMGKSYKALSVDRKIEADSDGSTVAI
LDLVGNDESGYNNVDQKMMLEKILPILSEREQQILQCTYFDNMSQKETGELLGISQMHVS
RLQRRSLRKLREAIQAESTEVFD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaaatctcaaccacacaatagcggaagagatgaggtttaccaatggattgaa
tacttgcaagaggagccaaccgatgaagtggtacaagaaaagattgtgctaacttacaag
gatcttgtagagtccattgctagaaaatattccaaaaatagcgccattcacgaggatctt
gtacaggtaggtatgattggattattagcagcagtgagaaggtatgatgcatcatttggt
aaatcctttgaatcttttgctattccaacaataataggagagataaagcgattcataaga
gataaaacatggagtgtccatgtacctagaagaatcaaagaacttggcccgaaaattaaa
aaagcagtagatgaattaacaactgctaatcaagtatccccctcaatcaaagaaattgct
gattatctggaagtcacagaagaagatgttctggaaacaatggaaatgggtaaaagttac
aaggctttatccgtggatcgaaagattgaagcagattccgatggcagtactgtagccatt
ttggatttggtaggcaatgacgaaagtggatataataatgttgatcaaaaaatgatgctg
gagaaaattctacctatcctatcagaaagggagcagcagattttacagtgtacgtatttt
gataatatgagccaaaaagaaacaggcgaattgctagggatctcacaaatgcatgtctcc
aggctacaacgccgatctctacgtaaattgagagaagccatacaagctgagagcacggag
gtatttgattga
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