Virgibacillus sp. SK37: X953_03595
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Entry
X953_03595 CDS
T03219
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vir
Virgibacillus sp. SK37
Pathway
vir03420
Nucleotide excision repair
vir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X953_03595
03430 Mismatch repair
X953_03595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vir03400
]
X953_03595
Enzymes [BR:
vir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X953_03595
DNA repair and recombination proteins [BR:
vir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X953_03595
MMR (mismatch excision repair)
Other MMR factors
X953_03595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
AAA_22
RE_ApaLI
FWWh
Motif
Other DBs
NCBI-ProteinID:
AIF42462
LinkDB
All DBs
Position
657415..659634
Genome browser
AA seq
739 aa
AA seq
DB search
MSQTMGDLLSGLNKEQQEAVKHTEGPLLIMAGAGSGKTRVLTHRIAYLLGEKDVAARNVL
AITFTNKAAREMKERVRKLVGPESEYMWVSTFHSMCVRILRRDIDRIGYNQNFTILDSSD
QLSVIKQVLKNLDIDPKKFDPRAMLGQISAAKNELITPEEFSNKVGNFYDRQVSKVYEGY
QKMLTKNQSLDFDDLIMQTIHLFKRVPEVLEYYQRRFQYIHVDEYQDTNHAQYSLVKQLA
NRYQNLCVVGDSDQSIYRWRGADITNILTFEKDYPSSKTVFLEQNYRSTKSILEAANKVI
ANNPGRKPKNLWTENPDGKNIHYYQGATEQEEALFVTNKIQELTRDGFSPSDIAILYRTN
AQSRAIEATFMKSNIVYQMVGGHKFYERKEIKDLTAYLRLITNPDDDISFERVVNVPKRG
IGKTSIEKLREHATLHDISFFEAVKEVDFTGVSKKAANALAEFGNLIKTLSQQQEFLTAT
DMVEAVLQRTGYEEMLKSERTIEAQSRLENLEEFMTVTKEFEASAEDKTLVAFLTDLALV
ADIDKVDEEDPTNEEKITLMTLHAAKGLEFPVVFLIGMEENVFPHSRSLMEEEEMEEERR
LAYVGITRAEQQLYLTHAKMRTLFGRTNMNPVSRFINEIPEELIDGIEEANAAMFGGSIF
GQPKDKPAPVKRKAQKMQQTTGAESKTWGPGDKANHKKWGVGTVVKVQGEGEGMELDIAF
PAPTGIKRVLAKFAPITKE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagacaatgggtgacttattatctggattaaataaagaacagcaggaagcggta
aaacatacagaagggccacttctaataatggcaggagcgggaagtggtaaaacacgggta
ctaacacatcgaattgcttatttgctaggtgagaaagatgtagcagcacggaatgtactc
gcaattacctttacaaataaagcagccagagaaatgaaagaacgagtgagaaagctggta
ggtccggaaagtgaatatatgtgggtttcgaccttccactccatgtgtgttcgtattctt
agaagagatattgaccgaatcggttacaatcaaaatttcaccattttggacagtagtgat
cagttgtctgttattaagcaagttctaaaaaacttagatatcgaccctaaaaagtttgat
cctagagcaatgcttgggcaaattagtgcagcaaaaaatgaattaattacaccagaggaa
ttcagcaacaaagtagggaatttttatgatcgacaggtttccaaagtttatgaaggctat
caaaaaatgctgaccaaaaatcaatccctagattttgatgatttaatcatgcaaactatc
catttatttaagcgggtaccggaagtactggaatattatcaacggagatttcaatatatc
catgtagatgagtatcaggatacaaaccatgcccagtattcattggttaagcaactagct
aatcgatatcaaaatttatgtgtcgtaggggattcggatcagtccatttaccgttggcgt
ggagcagatattacgaatatcctaaccttcgaaaaggattatccaagctcaaaaactgta
tttttggagcagaactaccggtccaccaagtctattctggaagcagcgaacaaagttatt
gcaaacaatccaggacgaaaaccgaaaaatctatggacagagaacccggatggaaagaat
atacactactatcaaggggcgacagaacaagaagaagctctttttgtaacgaataaaatc
caagaacttaccagagatggattttcaccaagtgatattgccattctttatcggacaaat
gcccagtcgcgagcaattgaggccacatttatgaagtccaatattgtgtatcaaatggta
ggtgggcataagttctatgagcgaaaagaaataaaagatttaactgcatacctgcgatta
atcacaaatccggatgacgatatcagttttgaacgtgtagtgaatgtgccaaagcgagga
ataggtaaaacatctattgagaagctgagagagcatgcgacattacatgatatatctttt
tttgaagctgtaaaagaagtggacttcaccggcgtatccaaaaaagcagcaaatgcactt
gctgaatttggcaacctgattaagacactttcacagcagcaggaatttttaactgctact
gatatggttgaggcagtactgcaacggacaggctatgaagagatgctaaagagtgagcgg
acaattgaagcgcaaagccgtctggagaacttggaagaattcatgactgttacgaaggaa
tttgaagcatcagcagaggataagacgctagttgcctttctgactgatctggcattggta
gctgatatcgacaaggtggacgaggaagatcctactaatgaagagaagatcaccttaatg
acattgcatgccgctaaaggcttggagttcccggttgtgttcctgatcggtatggaggaa
aatgtatttccacatagtcgctcccttatggaagaagaagaaatggaagaagaacgcaga
cttgcttacgttgggatcactagagcagaacagcaactttatcttactcatgctaaaatg
cggacattattcggtagaacaaatatgaaccctgttagtcggtttataaacgaaataccc
gaggaacttattgatggaatagaagaggcgaatgcggccatgtttggtggtagtatcttc
ggtcaaccaaaggataagcctgccccagtgaagagaaaggctcagaaaatgcagcaaaca
accggagcagaaagtaaaacatggggacctggtgacaaggcaaaccataaaaagtggggt
gtcggtactgtcgttaaggttcaaggggaaggagaaggaatggagcttgatatagcattt
cctgccccaacagggatcaaacgggtattggcaaagttcgctccaattacgaaagaataa
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