Virgibacillus sp. SK37: X953_05105
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Entry
X953_05105 CDS
T03219
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vir
Virgibacillus sp. SK37
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vir03019
]
X953_05105
Messenger RNA biogenesis [BR:
vir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
X953_05105
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AIF42696
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Position
959791..960735
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AA seq
314 aa
AA seq
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MIKGIGTTAIGESFEGYMLIKDAIKGVTSNGKPFLTLMLRDKTGEIEAKLWDTTKEDEAV
CVPEQIIKLAGEINQFRGKAQLKILSFRPSQPTDDVHVSDFVEKAPVEKEELTEKLTEAI
FEMQNPALQRLVRAFIRKYQEDLLVYPAATKNHHEYVSGLAHHIVSMLAIARELHKLYPE
MNKDLLYAGIILHDLGKLKELSGVVTTSYTLEGKLLGHIPMMVEEIGLMAKELQIEGEEV
TILQHLILSHHGKAEWGSPKPPLVREAEVLHLIDLMDAKLNMMNRALSKVKPGEFTERMF
AMDNRSFYKPIFEK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagggattggcactacagctatcggggagtcttttgaaggttatatgttaatt
aaagatgcaataaaaggggtcaccagtaacgggaaaccattcttaacccttatgctacga
gataaaacaggggagatagaagctaaactatgggatactacaaaggaagatgaagctgta
tgtgtgcctgaacaaattattaagctggctggagaaataaatcagtttcgtggaaaggca
caattaaaaatactttcttttcgcccatcccagccaacagacgatgttcatgtatctgat
tttgtggaaaaggcaccggtagagaaagaagaattaaccgagaaattaacagaggcaatt
tttgaaatgcaaaatcctgcgctacaacgtcttgtcagagcttttataagaaagtatcaa
gaagatttattagtatatcctgcagcaaccaaaaaccatcatgagtatgtctctggattg
gcacaccatattgtcagtatgcttgcaattgccagggaattgcataagctttatcctgag
atgaataaagacttgttatatgctgggattattttacacgatttaggtaaactgaaagag
ctctccggtgttgtaacgaccagttatacattagaaggcaagctgcttggccatatacca
atgatggtagaagaaataggcttgatggctaaagagttgcaaattgaaggagaagaggta
acaatcctacagcatttaatcctatcccatcatggaaaagcggagtggggaagtcctaag
cctccattagtaagagaagcggaagtcttacacttaatagatttaatggatgcaaaatta
aatatgatgaatcgcgcattgagtaaagtgaaacccggagagtttaccgagcgaatgttt
gcaatggataatcggtctttttataaacctatatttgaaaaataa
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