Virgibacillus sp. SK37: X953_08755
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Entry
X953_08755 CDS
T03219
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vir
Virgibacillus sp. SK37
Pathway
vir03030
DNA replication
vir03410
Base excision repair
vir03420
Nucleotide excision repair
vir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X953_08755
03410 Base excision repair
X953_08755
03420 Nucleotide excision repair
X953_08755
03440 Homologous recombination
X953_08755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vir03032
]
X953_08755
03400 DNA repair and recombination proteins [BR:
vir03400
]
X953_08755
Enzymes [BR:
vir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X953_08755
DNA replication proteins [BR:
vir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
X953_08755
DNA repair and recombination proteins [BR:
vir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
X953_08755
NER (nucleotide excision repair)
GGR (global genome repair) factors
X953_08755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
XPG_I
HHH_5
Phage_cap_E
Motif
Other DBs
NCBI-ProteinID:
AIF43233
UniProt:
A0A075JT17
LinkDB
All DBs
Position
1593281..1595920
Genome browser
AA seq
879 aa
AA seq
DB search
MANKLVLIDGNSIIYRSFFALPLLNNDKGVYTNAVYGFTTMLLRILEEEKPTHMLVAFDA
GKTTFRHATYKEYKGGRQKTPPELSEQFPLLKEVLDAFQISHYELPNYEADDIIGTLSQE
AKKENWDVTVISGDKDLLQLVSDKVTVNLTKKGISDVESYTPAFLKEKMEITQEQIIDLK
ALMGDSSDNIPGVPGVGQKTATKLLKQFETLEKVYHHVDEVSGKKLKEKLINHKADAFMS
KELVTINCSSPIDVSLEKIGYEGYEAHKVSEIFKDLGFNSLLDKVEGSNGDEEKEKEVLK
DIDYKIVEDLTPEMITGKEALVIEMLGDNYHQADIEGIGITNEQGSYFLTVESMLTSTFF
KEWAENHQQEKYVFDAKQTLVALLRHNIHIKGIKFDMLLTSYLLNPSENNHEIPAIAHRM
GKKDVLFDDEIYGKGAKRKVPEHAILAEHIVRKTSALYVLKEKMDEQLKDNQQYELCKEL
EMPLALILGEMEHRGVHVDIEKLEEMGTNLKQRLTELEKEVYELAGENFNLNSPKQLGPI
LFEKLKLPVIKKTKTGYSTAADVLEQLEEEHEIIPKLLLYRQLGKLQSTYIEGLIKVTDK
ETHKIHTRFNQALTQTGRLSSIEPNLQNIPIRLEEGRKIRQAFVPAKENWIMFAADYSQI
ELRVLAHIAKDEKLIDAFNNNLDIHTQTAMDVFHVEREEVTSNMRRHAKAVNFGIVYGIS
DYGLSQSLGITRKEAKQFIERYFESYPGVKQYMDEIISAAKQKGFVTTLMNRRRYLPEIT
SRNFNLRSFAERTAMNTPIQGSAADIIKKAMIDLDGKLKETSLEARMLLQVHDELIIEAP
KEELEQLKEIVPAIMENTVDLVVPLKVDYAYGNSWFDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataaactagttcttattgatggcaacagtattatctatcgctcttttttcgca
ttgccattattaaataatgataaaggtgtttatacaaatgcagtttatggatttactaca
atgctgcttcggattttggaggaagaaaaaccaacacatatgctcgtcgcttttgatgct
gggaaaacaacctttcgtcatgcaacctacaaagaatataaaggtggcaggcaaaagact
ccgccagaactatcagaacaatttcctttattaaaagaagttctggatgcttttcaaatc
tctcattacgaattgccgaattatgaggctgatgacatcattggtacattatcacaagaa
gcaaaaaaggaaaattgggatgtcaccgtaatctctggtgataaagatttgttacagtta
gtatctgataaagtaaccgtcaaccttacgaaaaaaggtattagtgatgtggaaagctat
acaccagctttcttaaaagaaaaaatggaaattactcaagagcaaattatagatttaaaa
gcattaatgggggatagctcggataatatcccgggtgtgcctggagtagggcaaaaaacg
gcaaccaaattacttaagcagttcgaaacattggaaaaggtctatcatcatgttgatgag
gtaagtggtaagaaactgaaagaaaaattgattaaccacaaagcagatgcgtttatgagc
aaagaacttgttaccattaattgtagttctccaatagatgtttcacttgaaaaaataggt
tatgaaggatatgaggcacacaaggtcagtgaaatcttcaaagaccttgggtttaattca
cttttagataaggtagaaggttcaaatggagacgaagaaaaggaaaaagaagttcttaag
gatattgactacaaaatcgtagaggatcttactccggaaatgataacaggaaaagaggca
ttggttattgaaatgcttggtgataactaccatcaggcagatattgaaggaattggaatt
acgaatgagcaaggttcttattttcttactgtagagtcaatgcttacttctactttcttt
aaagagtgggcagaaaatcaccagcaagaaaagtatgtcttcgatgcgaaacaaacatta
gtggctttacttagacataacattcacatcaagggaattaagtttgatatgctgttaact
tcttatttactaaatccttctgagaataatcatgaaataccggcaattgcacatcggatg
ggaaaaaaagatgtattattcgacgatgaaatttatggaaagggtgcgaagaggaaagta
cctgagcatgcaatcttagctgagcacattgttagaaaaaccagcgccttatatgtactg
aaagagaagatggacgaacaacttaaagacaatcagcaatatgaattatgtaaagaactt
gaaatgcctcttgctttaattcttggtgaaatggaacacagaggggtccatgtggatata
gaaaaattagaggaaatgggtacaaatttaaaacaacgtttaactgaattagagaaggaa
gtctatgaattggccggtgaaaactttaatctaaattcacctaagcagcttggaccaatt
ttatttgaaaagcttaagctgcctgtgatcaaaaaaacaaagacaggttattcaacagct
gcagatgtgttagagcaattggaagaagagcatgaaattattccaaagcttttgctatat
agacaactaggcaagcttcaatccacgtatattgaggggttaataaaagttacggacaaa
gaaacacataagatccatacgaggtttaatcaagcattgacacagactggaagattgagc
tcgattgagcctaatctgcaaaatattccgatacggttggaagagggtagaaaaattaga
caagcttttgtacctgccaaggaaaattggattatgtttgcagccgattactcacaaatc
gaacttcgcgtattagcccatattgctaaagatgaaaaattgattgacgcatttaataat
aatttagatattcatacacagacagctatggacgtatttcacgtggaaagagaagaagta
acctcaaacatgcggcgccatgcgaaagcggtcaatttcggaattgtatacggtattagt
gattatgggctttctcagagtttggggatcacccgtaaagaggcaaagcaatttattgaa
cgctattttgaaagttatccaggtgtgaagcaatatatggatgaaattatttccgcagcc
aaacaaaaaggatttgtaactacattaatgaatcgaagaagatatttaccggaaattacg
agtagaaattttaatttaagaagctttgctgaacgtacagcaatgaacacaccgatacag
ggaagtgctgcagacattataaaaaaagcgatgattgatttggatggaaaattaaaggaa
acgagtttggaagctagaatgctactccaagttcatgatgagttaattattgaagcacca
aaagaagagttagagcaattaaaagaaatagtacctgctattatggaaaatacggtagat
ttagtcgtgcctttaaaagtagactatgcctatggtaatagctggttcgatgctaagtaa
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