KEGG   Virgibacillus sp. SK37: X953_08755
Entry
X953_08755        CDS       T03219                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
vir  Virgibacillus sp. SK37
Pathway
vir03030  DNA replication
vir03410  Base excision repair
vir03420  Nucleotide excision repair
vir03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    X953_08755
   03410 Base excision repair
    X953_08755
   03420 Nucleotide excision repair
    X953_08755
   03440 Homologous recombination
    X953_08755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vir03032]
    X953_08755
   03400 DNA repair and recombination proteins [BR:vir03400]
    X953_08755
Enzymes [BR:vir01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     X953_08755
DNA replication proteins [BR:vir03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     X953_08755
DNA repair and recombination proteins [BR:vir03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     X953_08755
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     X953_08755
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_2 XPG_I HHH_5 Phage_cap_E
Other DBs
NCBI-ProteinID: AIF43233
UniProt: A0A075JT17
LinkDB
Position
1593281..1595920
AA seq 879 aa
MANKLVLIDGNSIIYRSFFALPLLNNDKGVYTNAVYGFTTMLLRILEEEKPTHMLVAFDA
GKTTFRHATYKEYKGGRQKTPPELSEQFPLLKEVLDAFQISHYELPNYEADDIIGTLSQE
AKKENWDVTVISGDKDLLQLVSDKVTVNLTKKGISDVESYTPAFLKEKMEITQEQIIDLK
ALMGDSSDNIPGVPGVGQKTATKLLKQFETLEKVYHHVDEVSGKKLKEKLINHKADAFMS
KELVTINCSSPIDVSLEKIGYEGYEAHKVSEIFKDLGFNSLLDKVEGSNGDEEKEKEVLK
DIDYKIVEDLTPEMITGKEALVIEMLGDNYHQADIEGIGITNEQGSYFLTVESMLTSTFF
KEWAENHQQEKYVFDAKQTLVALLRHNIHIKGIKFDMLLTSYLLNPSENNHEIPAIAHRM
GKKDVLFDDEIYGKGAKRKVPEHAILAEHIVRKTSALYVLKEKMDEQLKDNQQYELCKEL
EMPLALILGEMEHRGVHVDIEKLEEMGTNLKQRLTELEKEVYELAGENFNLNSPKQLGPI
LFEKLKLPVIKKTKTGYSTAADVLEQLEEEHEIIPKLLLYRQLGKLQSTYIEGLIKVTDK
ETHKIHTRFNQALTQTGRLSSIEPNLQNIPIRLEEGRKIRQAFVPAKENWIMFAADYSQI
ELRVLAHIAKDEKLIDAFNNNLDIHTQTAMDVFHVEREEVTSNMRRHAKAVNFGIVYGIS
DYGLSQSLGITRKEAKQFIERYFESYPGVKQYMDEIISAAKQKGFVTTLMNRRRYLPEIT
SRNFNLRSFAERTAMNTPIQGSAADIIKKAMIDLDGKLKETSLEARMLLQVHDELIIEAP
KEELEQLKEIVPAIMENTVDLVVPLKVDYAYGNSWFDAK
NT seq 2640 nt   +upstreamnt  +downstreamnt
atggcgaataaactagttcttattgatggcaacagtattatctatcgctcttttttcgca
ttgccattattaaataatgataaaggtgtttatacaaatgcagtttatggatttactaca
atgctgcttcggattttggaggaagaaaaaccaacacatatgctcgtcgcttttgatgct
gggaaaacaacctttcgtcatgcaacctacaaagaatataaaggtggcaggcaaaagact
ccgccagaactatcagaacaatttcctttattaaaagaagttctggatgcttttcaaatc
tctcattacgaattgccgaattatgaggctgatgacatcattggtacattatcacaagaa
gcaaaaaaggaaaattgggatgtcaccgtaatctctggtgataaagatttgttacagtta
gtatctgataaagtaaccgtcaaccttacgaaaaaaggtattagtgatgtggaaagctat
acaccagctttcttaaaagaaaaaatggaaattactcaagagcaaattatagatttaaaa
gcattaatgggggatagctcggataatatcccgggtgtgcctggagtagggcaaaaaacg
gcaaccaaattacttaagcagttcgaaacattggaaaaggtctatcatcatgttgatgag
gtaagtggtaagaaactgaaagaaaaattgattaaccacaaagcagatgcgtttatgagc
aaagaacttgttaccattaattgtagttctccaatagatgtttcacttgaaaaaataggt
tatgaaggatatgaggcacacaaggtcagtgaaatcttcaaagaccttgggtttaattca
cttttagataaggtagaaggttcaaatggagacgaagaaaaggaaaaagaagttcttaag
gatattgactacaaaatcgtagaggatcttactccggaaatgataacaggaaaagaggca
ttggttattgaaatgcttggtgataactaccatcaggcagatattgaaggaattggaatt
acgaatgagcaaggttcttattttcttactgtagagtcaatgcttacttctactttcttt
aaagagtgggcagaaaatcaccagcaagaaaagtatgtcttcgatgcgaaacaaacatta
gtggctttacttagacataacattcacatcaagggaattaagtttgatatgctgttaact
tcttatttactaaatccttctgagaataatcatgaaataccggcaattgcacatcggatg
ggaaaaaaagatgtattattcgacgatgaaatttatggaaagggtgcgaagaggaaagta
cctgagcatgcaatcttagctgagcacattgttagaaaaaccagcgccttatatgtactg
aaagagaagatggacgaacaacttaaagacaatcagcaatatgaattatgtaaagaactt
gaaatgcctcttgctttaattcttggtgaaatggaacacagaggggtccatgtggatata
gaaaaattagaggaaatgggtacaaatttaaaacaacgtttaactgaattagagaaggaa
gtctatgaattggccggtgaaaactttaatctaaattcacctaagcagcttggaccaatt
ttatttgaaaagcttaagctgcctgtgatcaaaaaaacaaagacaggttattcaacagct
gcagatgtgttagagcaattggaagaagagcatgaaattattccaaagcttttgctatat
agacaactaggcaagcttcaatccacgtatattgaggggttaataaaagttacggacaaa
gaaacacataagatccatacgaggtttaatcaagcattgacacagactggaagattgagc
tcgattgagcctaatctgcaaaatattccgatacggttggaagagggtagaaaaattaga
caagcttttgtacctgccaaggaaaattggattatgtttgcagccgattactcacaaatc
gaacttcgcgtattagcccatattgctaaagatgaaaaattgattgacgcatttaataat
aatttagatattcatacacagacagctatggacgtatttcacgtggaaagagaagaagta
acctcaaacatgcggcgccatgcgaaagcggtcaatttcggaattgtatacggtattagt
gattatgggctttctcagagtttggggatcacccgtaaagaggcaaagcaatttattgaa
cgctattttgaaagttatccaggtgtgaagcaatatatggatgaaattatttccgcagcc
aaacaaaaaggatttgtaactacattaatgaatcgaagaagatatttaccggaaattacg
agtagaaattttaatttaagaagctttgctgaacgtacagcaatgaacacaccgatacag
ggaagtgctgcagacattataaaaaaagcgatgattgatttggatggaaaattaaaggaa
acgagtttggaagctagaatgctactccaagttcatgatgagttaattattgaagcacca
aaagaagagttagagcaattaaaagaaatagtacctgctattatggaaaatacggtagat
ttagtcgtgcctttaaaagtagactatgcctatggtaatagctggttcgatgctaagtaa

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