Virgibacillus sp. SK37: X953_08975
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Entry
X953_08975 CDS
T03219
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vir
Virgibacillus sp. SK37
Pathway
vir00020
Citrate cycle (TCA cycle)
vir00190
Oxidative phosphorylation
vir00650
Butanoate metabolism
vir00720
Other carbon fixation pathways
vir01100
Metabolic pathways
vir01110
Biosynthesis of secondary metabolites
vir01120
Microbial metabolism in diverse environments
vir01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
X953_08975 (sdhA)
00650 Butanoate metabolism
X953_08975 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
X953_08975 (sdhA)
00720 Other carbon fixation pathways
X953_08975 (sdhA)
Enzymes [BR:
vir01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
X953_08975 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
AlaDh_PNT_C
FAD_oxidored
NAD_binding_8
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AIF43271
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Position
1639424..1641187
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AA seq
587 aa
AA seq
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MSNRKIAVIGGGLAGLMATIKAAEAGVNVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGD
SPAIHFDDTVYGGDFLANQPPVKAMCDAAPSIINMLDRMGVMFNRTPEGLLDFRRFGGTQ
HHRTAYAGATTGQQLLYALDEQVRRYEVEGLVTKYENWEFVRAIIDDEGVGKGIVAQDIK
SHEIKAFPSDATIFATGGPGIIFGKSTNSMINTGSAASKLYQQGAKYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGEPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK
LGINGENMVYLDLSHKDPKELDVKLGGIIEIYEKFVGEDPRKVPMKIFPAVHYSMGGLWV
DYEQMTSIPGIFAAGECDYSQHGGNRLGANSLLSAIYGGSVAGPNAIKYIDGLDKHVEDL
PSDLFDENTKQEKENFEALMNMKGEENAYQLHKELGEWMTDNVTVVRDNDKLLKTDEKIK
ELLERWENININDTSRWSNQGVMFTRQLKNMLHLARVITMGAYNRDESRGAHYKPEFPER
NDEEWLKTTIASFDKDKNSPVFSYEEVDTSLIPPRKRDYTKKSEGSK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccgaaaaatagctgttatcggcgggggtcttgccggcttaatggcaacaata
aaagctgctgaagcaggcgtgaatgtagatcttttctctattgtacctgtaaagcgctct
cactctgtgtgtgcccaaggtggtattaatggcgcggtaaatacaaaaggagaaggtgat
tctccggcaatccactttgatgatactgtctatggtggagatttcttagcaaatcagcct
ccggtaaaagcgatgtgtgatgctgcgccgagtatcataaatatgttggaccgcatgggt
gttatgttcaaccgtactccagagggattactagatttcagacgctttgggggtacacag
catcatcgtactgcatacgcaggggcgactactgggcaacagttgttatatgccttggat
gaacaagttcgccgttatgaagtagaaggcttagtaactaagtatgaaaattgggaattt
gttcgtgcaattattgatgatgaaggtgttgggaaaggaattgtagcccaggatattaag
tcacatgaaataaaggcatttccttcagatgctactatttttgcaacaggtggtcctggg
attatattcggtaagtcaacaaattcgatgataaatacaggttcagctgcaagtaagcta
taccaacagggtgcaaaatatgcaaatggtgagtttattcaaattcatcctaccgctatt
cctggtgatgacaagctccgtttaatgagcgagtctgcacgtggggaaggtggccgtatc
tggacatacaaagatggagaaccatggtacttcttagaagagaagtatccggcttatgga
aatcttgtcccacgcgatatagctacacgtgaaatttttgatgtttgtgttaatcagaaa
ctaggcattaatggtgaaaatatggtttatttggatctttcccataaagatccaaaagaa
ttggatgttaaacttggtggaattatagaaatctatgaaaaattcgttggtgaagacccg
cgaaaagtaccaatgaagattttccctgctgttcactactctatgggaggactttgggta
gattatgaacagatgaccagcatacctggtatctttgcagcaggagaatgcgattattct
cagcatggcggtaatcgtttaggagcaaactcccttctatcagcaatttatggaggttca
gtagcgggtccgaatgctattaaatatattgatggcttagataagcatgtagaggattta
ccttctgatttattcgatgagaatacgaagcaagaaaaagaaaactttgaagcattaatg
aacatgaagggtgaagaaaacgcatatcaacttcataaagagcttggagaatggatgaca
gacaacgttacagtagttagagataatgataaacttctaaaaacagatgagaagattaaa
gaattactcgaacgttgggagaatatcaacattaatgatacttcccgctggagcaaccaa
ggagtaatgtttacaaggcagttaaagaacatgttgcacctggcaagggtgattacaatg
ggagcttataatcgtgatgaaagccgaggagctcattacaaacctgaattcccagaaaga
aatgacgaagagtggttgaagacgacaattgcctcttttgataaggataaaaattcacct
gtattttcatacgaagaggttgatacgtcgctgattccaccacgtaaacgtgattatacg
aagaaaagcgaagggagtaagtaa
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