Virgibacillus sp. SK37: X953_09370
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Entry
X953_09370 CDS
T03219
Name
(GenBank) thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
vir
Virgibacillus sp. SK37
Pathway
vir04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
X953_09370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vir03016
]
X953_09370
Enzymes [BR:
vir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
X953_09370
Transfer RNA biogenesis [BR:
vir03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
X953_09370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
ATP_bind_3
QueC
DUF7411
Arginosuc_synth
Asn_synthase
Cofac_haem_bdg
Motif
Other DBs
NCBI-ProteinID:
AIF43340
UniProt:
A0A075JNQ8
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All DBs
Position
1719634..1720746
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AA seq
370 aa
AA seq
DB search
MKSNKDIRVVVGMSGGVDSSVAALLLKQQGYDVVGIFMKNWDDTDEFGVCTATEDYEDVV
RVCNQIGIPYYAVNFEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFLDHAMSLG
ADYLATGHYAQVRENNGRYEMLRGVDDNKDQTYFLNQLTEDVLEKVMFPLGNMPKSRVRE
IAKENDLATATKKDSTGICFIGERNFKEFLSEYLPAQPGKMTTLDGKEKGQHDGLMYYTI
GQRQGLGIGGAGDPWFVVGKNLKDNILYVEQGYSNEKLYSDALIATDVNWITPDKVQDTF
TCTAKFRYRQKDSEVKVNILPDNKVEVVFTDRERAVTPGQAVVFYDGEVCLGGGTIDEII
KNGKALDYVG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaataaagatatacgcgtagttgtaggaatgagcggaggagtagattcttct
gttgctgctcttctattaaagcaacaaggatatgatgttgtagggatatttatgaaaaat
tgggacgatacagacgaatttggtgtctgcacagccacagaagattatgaagatgttgtg
cgagtttgtaatcaaattggcattccgtattatgctgttaattttgaaaagcaatattgg
gataaggttttcacttattttcttgatgagtatcgagcaggaagaaccccgaatccagat
gtaatgtgtaataaagaaattaaatttaaagcttttttggatcatgccatgtcattggga
gcagattacctggctacaggtcactatgcgcaggttagagagaataatggacgctatgag
atgttacgtggagtggatgataataaagatcagacatactttctcaatcaattgacagag
gatgtactagaaaaagtaatgtttccattgggtaatatgcctaaatctcgtgttcgtgaa
atcgccaaggagaatgatttggcaacagctacaaaaaaagatagtactggcatttgtttt
attggggagcgtaatttcaaggaattcctaagtgaatacctgcccgcacagcctggcaaa
atgacaacattagatggtaaagaaaagggtcaacacgatggattaatgtattatacaatc
ggacaacggcaaggacttggaataggtggagctggcgatccctggtttgttgttggtaaa
aaccttaaagacaatattctatatgtggaacaggggtattccaatgaaaaactatattct
gatgcattaattgccacagatgtaaattggataacaccggataaagtgcaagatactttt
acatgtactgctaaatttcgttatcgccaaaaagatagtgaagtaaaagtgaacatactt
cctgataataaagtggaagtggtgtttacagatcgagaacgtgctgttacaccaggacaa
gctgtagttttttacgatggagaagtttgcctgggtggaggcacaatagatgaaattatt
aaaaatggcaaagcacttgactatgtaggttaa
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