Virgibacillus sp. SK37: X953_09555
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Entry
X953_09555 CDS
T03219
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vir
Virgibacillus sp. SK37
Pathway
vir03030
DNA replication
vir03430
Mismatch repair
vir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X953_09555
03430 Mismatch repair
X953_09555
03440 Homologous recombination
X953_09555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vir03032
]
X953_09555
03400 DNA repair and recombination proteins [BR:
vir03400
]
X953_09555
Enzymes [BR:
vir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X953_09555
DNA replication proteins [BR:
vir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X953_09555
DNA repair and recombination proteins [BR:
vir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X953_09555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AIF43374
LinkDB
All DBs
Position
1752245..1753261
Genome browser
AA seq
338 aa
AA seq
DB search
MSYMEIMKKVKNKQIAPVYLLYGSENYFIQKLQKEIKRQVLGKEMDNVSFYDLDETPIQE
VIGDVETYPFFGERKLVIATKPSFLKAKPERTTVEHNLEILENYLSMPVDYSVLILIAPY
EKIDERKKLTKVLKKNADIAVCNPIKEYDVRKWIDNLAGQLRVFIDQDAYDIFEAELSTN
LNLLENELKKMALFVGEKGTITRAVAEKLISHTANSSSLRLVDTVIDRDLAQAIAIYKDL
EKMKEEPIALIGLLAFQFRTILRVKLLKLKGYSQSQMQKQLGVHPYVIKIALAREKKFTV
EKLEAAMDKLAQADASMKQGTMEKDLVFQLLLYDLINE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatatggaaataatgaaaaaggttaaaaataaacaaatagcaccagtttattta
ttatacggttcagaaaattactttatacagaaattgcaaaaagaaataaaaagacaagtg
cttggtaaagaaatggataatgtgtcattttatgatttagatgaaacaccgatacaagaa
gtaattggggatgtagaaacttatcctttctttggggagagaaagttagttattgcaact
aagccttcttttcttaaagctaaaccagagaggaccacagtggaacataatttggaaata
ctagagaattatctctctatgccggttgactattccgtgcttattttgatagcaccatat
gagaaaattgatgaacggaaaaagctgactaaagtgcttaaaaagaatgcagacattgca
gtgtgcaacccaataaaagagtatgatgtaagaaaatggatagataatttggctggccag
ttaagagtgttcattgatcaagatgcttatgacatatttgaagcagaactatccaccaat
ttgaatctcctggaaaatgaattgaaaaagatggctttatttgttggagaaaaagggacg
atcacgagagcagttgctgagaaattaatatcacatactgcgaacagctcttcattacgg
ttagtggatactgtgattgatcgagatttagcccaggcaattgctatttataaggatttg
gaaaaaatgaaagaggaaccaatagcattaattggtttattagccttccaatttcgtacc
attttgcgtgttaaattattaaagcttaaaggatacagtcaatcacaaatgcagaagcaa
cttggggttcatccgtacgtaataaaaattgccctggcaagagaaaagaaattcactgta
gaaaaattagaagctgcgatggataagttggctcaagctgatgcctccatgaagcagggg
acaatggaaaaggatttagtttttcagctgttattatatgaccttattaacgaataa
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