Virgibacillus sp. SK37: X953_09620
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Entry
X953_09620 CDS
T03219
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
vir
Virgibacillus sp. SK37
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vir03016
]
X953_09620
Enzymes [BR:
vir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
X953_09620
Transfer RNA biogenesis [BR:
vir03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
X953_09620
Prokaryotic type
Methylthiotransferases
X953_09620
SSDB
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Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
eRF1_2
Motif
Other DBs
NCBI-ProteinID:
AIF43386
LinkDB
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Position
1767197..1768555
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AA seq
452 aa
AA seq
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MTTVAFHTLGCKVNHYETEGIWRMFKEHGYERVDFDHDADVYVINTCTVTNTGDKKSRQV
IRRAIRKNPEGIVCVTGCYAQTSPGEIMEIPGVDIVVGTQDRKNMLQYIEEHKKTREPIN
GVTNIMKNRVFEEMDVPEFTDRTRASLKIQEGCNNFCTFCIIPWSRGLLRSRDPESVVDQ
AQKLVDAGYKEIVLTGIHTAGYGEDMTDYNFAMLLNDLETKVKGLKRIRISSIEASQITD
EVIEALDQSEKIVRHLHIPLQSGSDSVLARMRRKYSSQFYKEKVEKIKKALPGLAITSDV
IVGFPGETDEEFMETYDFIKDIGFSELHVFPFSRRTGTPAARMNNQVNEELKNERVHQLI
ELSNQLAKQYAANYEDEVLEVIPEEHSEDPLRPELLIGYTDNYLKVQFEGTPDMIGKIVR
VKLTKAGYPINEGKFVKIMDNATHSMAKSVIN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagtggcttttcatacattaggttgtaaagtgaatcattatgaaacagaaggc
atttggcgaatgtttaaagaacatggatatgaacgtgtagattttgaccatgatgccgat
gtttatgtaattaatacgtgtactgtcacaaatacgggagataaaaaaagcaggcaggta
atacgaagggctatacgcaaaaaccctgaaggaattgtatgtgttaccggatgttatgct
caaacatctccaggtgaaataatggagattcccggagtggatattgtggtaggaacacag
gaccgtaaaaatatgcttcaatatattgaagaacataaaaagactagagagccaattaat
ggtgtaacaaatataatgaaaaatcgtgtattcgaagaaatggatgttcctgaatttaca
gacagaaccagagcttccttgaagattcaagaaggttgtaacaacttctgtacattttgt
attattccatggtcaagaggattgcttcgctcaagggatccggaaagtgtagtagaccaa
gcccaaaagctagttgatgctggttacaaggaaattgtgttgacaggaattcatacagca
ggctatggagaagacatgactgattataatttcgctatgttgctgaatgatcttgaaaca
aaggtaaaaggattaaagcgaattcgtatctcttccatcgaggcaagtcagataacggat
gaagtgattgaggcacttgatcaatcggaaaaaattgtccgccacctccatattcctctg
caatcaggttctgatagtgtacttgcaagaatgaggagaaaatactccagtcaattctat
aaagaaaaagtagaaaaaataaaaaaagcactacctggattggcgataacttcagatgtt
attgttgggtttcctggtgaaacagacgaagagttcatggagacatatgattttattaaa
gatattggcttttctgaattacatgtctttccgttctcccgaagaacagggactcctgcc
gctaggatgaataaccaagtgaatgaagaactgaaaaatgaacgtgtacaccagttaatt
gagttatcaaatcaattggctaaacaatatgctgctaattatgaagatgaagttttggaa
gttattccagaagaacattccgaagaccctctacggcctgaattacttattggttatacg
gataattatttaaaagtccaatttgaaggtactccagacatgattggaaagattgttaga
gttaagttaactaaagccgggtatccaatcaatgaaggtaaattcgttaaaattatggac
aatgctacacattcgatggcaaagtctgtaataaactag
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