Virgibacillus sp. SK37: X953_09695
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Entry
X953_09695 CDS
T03219
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
vir
Virgibacillus sp. SK37
Pathway
vir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X953_09695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vir03400
]
X953_09695
DNA repair and recombination proteins [BR:
vir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
X953_09695
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
X953_09695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AIF43399
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Position
1780428..1781171
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AA seq
247 aa
AA seq
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MLEKVDGVILKTQDYGETHKIITIYSRKLGKISTLARGAKKTKSRMAAVTQPFIYGNFFV
YLNKGLSTIQQGEIEYSFRAIREDIFKTAYTAYITELTDKLVDPQIPDPFLFEELYQTMS
WIEGHEDVEIPIMMYELKMFAKGGFGPTVNGCANCGNKEFPYAFSIAEGGLLCKKCRYLD
EGAIHLPDSVSKLLHLFTGVELKRIGTISVKTENRQLIRKILDAYYEQYGGYFLKSKRFL
RQLDLLK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaaagtggatggggttattttgaaaacgcaagactatggagaaacacataaa
atcatcactatttatagtaggaaattaggaaagatatccactctcgctcgcggcgccaaa
aaaacaaaaagtagaatggctgcagttacgcagccgttcatttatggaaactttttcgtt
tatttaaataaaggtcttagtactattcagcaaggtgaaattgaatattcttttagagca
ataagggaagacatatttaaaacagcttatactgcgtatattacagagctgacggataaa
ttagttgaccctcagataccagatccatttttgtttgaagaattatatcaaacaatgtca
tggattgagggacatgaagatgtggaaattccaataatgatgtatgaattaaaaatgttt
gctaaaggtggatttggaccaacggtaaacggttgtgcaaactgcggaaacaaggaattt
ccatatgcattttctatagctgaaggtggacttttgtgtaaaaaatgtcggtatttggat
gaaggagctattcatttgccggattcagtatcgaaattacttcatctgtttacaggggtt
gagttaaaacgtattggaaccatttctgtaaaaacggaaaataggcagttgatcagaaag
atacttgatgcctattatgagcaatacggcggttattttttgaaatccaaacgattttta
agacaattagatcttctaaaatag
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