Virgibacillus sp. SK37: X953_10840
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Entry
X953_10840 CDS
T03219
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vir
Virgibacillus sp. SK37
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vir03032
]
X953_10840
03036 Chromosome and associated proteins [BR:
vir03036
]
X953_10840
03400 DNA repair and recombination proteins [BR:
vir03400
]
X953_10840
DNA replication proteins [BR:
vir03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
X953_10840
Chromosome and associated proteins [BR:
vir03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
X953_10840
DNA repair and recombination proteins [BR:
vir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
X953_10840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
DUF2267
Rpf1_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AIF43562
UniProt:
A0A075JQ27
LinkDB
All DBs
Position
1976107..1976379
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTDLVNAVAEKSDLSKKDATKAVDAVFESVMDSLKNGDKVQLIGFGNFEVRERSARKG
RNPQTGEEIEIPASKVPAFKPGKALKDIVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagacctagtgaatgctgtagctgagaaaagtgatctttctaagaaagac
gcaactaaagcagtagatgcagtttttgaatctgtcatggattcacttaaaaatggtgac
aaagtacaattaatcggttttggtaactttgaagtacgtgagcgttcagcccgtaaaggc
cgtaacccgcaaactggggaagaaattgaaatcccagcaagcaaagtacctgcttttaaa
ccaggtaaagcccttaaagacattgtaaaataa
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