KEGG   Virgibacillus sp. SK37: X953_11545
Entry
X953_11545        CDS       T03219                                 
Name
(GenBank) ribonuclease
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
vir  Virgibacillus sp. SK37
Pathway
vir03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    X953_11545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vir03019]
    X953_11545
Messenger RNA biogenesis [BR:vir03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     X953_11545
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 DUF3450 Exonuc_VII_L
Other DBs
NCBI-ProteinID: AIF43690
UniProt: A0A075JPW7
LinkDB
Position
complement(2108082..2109647)
AA seq 521 aa
MENPLIISILLALFLIVGIVVGYLIRKSIAEAKISSAETLAKQIVDEAHRNADAAKKEAL
LEAKDENHRLRQQTEEELRDRRNEVQKQENRLMQKEENLDRKSETLDKRELLLEKKEQSL
TEKQQQIEEMESKVEATLQEQQTELERISGYTTDQARQVILERIEKEVAHESALMIKEAE
NRAKEEADKKAKNILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRRETARMALEKLVQDGRIHPARIEEMVDKARREVDEYI
REIGEETTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSTEVAYLAGLLAAELGEDVT
LARRAGLLHDIGKAIDHEVEGSHVEIGKELAMKYKEHEVVINSIASHHGDEEPTSIISVL
VAAADALSAARPGARSETLENYIKRLEKLEEISESFAGVEKSFAIQAGREIRIMVKPDEI
DDIESVRIARDIRKRIEGELDYPGHIKVTVIRETRSVEYAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggaaaatcctttaatcatctccattttgcttgctctattcctaatcgtcggtattgtt
gttggttatctgattcgtaaatctattgcggaagctaaaatttctagtgcagagacgttg
gctaaacaaatagttgatgaggcacaccggaatgcagatgccgctaaaaaagaggcactt
cttgaggcgaaggatgaaaatcacagacttcgtcagcagacagaagaggaattgcgtgat
cgtcgaaatgaagtacaaaagcaagaaaatcgtctgatgcaaaaagaagaaaatctggac
agaaaaagtgaaacactggacaagcgtgagctcttgttagagaagaaagaacaatcacta
acagaaaaacaacaacaaattgaagaaatggaaagcaaagtggaagctacattacaagag
cagcaaacggagcttgaacgcatttcaggatatacaactgaccaggctagacaagttatt
ttagagcggatcgaaaaagaagtagcgcatgaatcggctttaatgattaaagaagcagaa
aaccgagcgaaagaagaagctgataaaaaggccaagaacattctttctttggcactccag
cgttgtgctgcagatcatgtcgccgaaacaactgtttcagttgttaacttgccaaatgat
gaaatgaaaggtcgtattattggccgtgaaggccgaaatatacgaactttggaaacactg
acaggtattgatttgattatcgatgatacaccagaggcagtaattttatccggttttgat
cctattcgaagagaaacagctcgtatggctctagaaaaactagttcaagacggacgaatc
catcctgctcgcatcgaggagatggtagataaagcacgtcgggaagttgatgagtatata
cgggaaattggtgaagagacaactttcgaagtaggtgtacatggtttacatcccgatctg
ataaaaattctcggtcgtctaaaatatcgtactagctatggacaaaatgtcttgaagcat
tctacagaggttgcatatcttgccgggctgctcgctgctgaattaggtgaagatgttacc
ttggcaagaagagctggattactacatgacattggaaaagcaattgatcatgaagtggaa
ggtagtcacgtagaaatcggcaaagagcttgcaatgaagtataaagagcacgaggtagtt
attaattcaattgcttctcatcatggtgatgaggaacctacttccattatctctgtacta
gttgcagcagccgatgcattatccgcagcaagacctggtgcacgaagtgaaacgttagaa
aactatatcaaacgtctagagaaattggaagaaatttctgagtcatttgctggtgttgag
aaatcatttgcaattcaagcaggtagagaaatccgtattatggttaaacctgatgaaatt
gatgacattgagtctgttcgaattgcccgcgatatacgaaagcgaatcgaaggagagctt
gattatccaggtcatataaaagttactgttattcgggaaacgagatcagtagagtatgca
aaataa

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