Virgibacillus sp. SK37: X953_12400
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Entry
X953_12400 CDS
T03219
Name
(GenBank) penicillin-binding protein 2B
KO
K08724
penicillin-binding protein 2B
Organism
vir
Virgibacillus sp. SK37
Pathway
vir00550
Peptidoglycan biosynthesis
vir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
X953_12400
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vir01011
]
X953_12400
Peptidoglycan biosynthesis and degradation proteins [BR:
vir01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
X953_12400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
DUF2633
Motif
Other DBs
NCBI-ProteinID:
AIF43849
UniProt:
A0A075JPN1
LinkDB
All DBs
Position
complement(2279550..2281775)
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AA seq
741 aa
AA seq
DB search
MKKHKTTHFMAGILMLVFVGIFLVLTGRFLYIQVTGEIDGVSLEKWAEEKRTASYTIDSE
RGKIYDKNGMTLAYDRPTFRMYAIVDKAYTSNPEEPKHVDDPEKTAELLAPLLDLEEEEI
RSIIEDGIEDEKFQVEFGKKGRELSQQKRDEIAALKLPGIKFEKEPIRYYPNGVFASHIL
GFARETEKETKNGVKREITGIAGMEKEMNDLLSGKDGHISYQRDKYNKKLLDPNEVITKP
QDGDDVYLTIDQKIQTLLEDSLSQVEEEYNPERITAVVMNPKTGEIVAMGNRPSYNPNNP
SDVENWYNDVVSTPVEAGSTVKMFTWASAIEEGVYNGNETYKSGSYRPNEQIQPINDHNG
GRGWDIITYDEGFQRSSNVAAAKLAWEKVGTDKFLEYLQAFGLDKETGIDLPNEVAGRIL
YNYSIEKITTSFGQGSTLTPIQQLKAASAIANDGKMMQPYVMKKIVNSTTGKNIKEKSPN
VVGNPISKETSDKVLKLLESVVNGEHGTGKMYQINDYTVGGKTGTAQIPNPDSSTGAYLR
GKENHIFSFLGMAPIEDPQLMIYVSVKKPELEPTETGSMPVSFIFTNVMENSLHYLNIDP
DKDPEKQIKEISIPELIGKPADKMRKTLSDKGLQVTVAGKGKITDASVKQGDKVLENDHI
ILITDKPTMPSVIGWSLRDVIQFAELLELKIETFGNGYSVTQNIKAGTPLKKGDYLGVEF
KPPTKESAESGSQEEETSGAD
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacataaaacaactcattttatggcgggtattctcatgcttgtttttgttggc
atctttctcgtactaacgggaagatttctatatattcaagtgacaggggaaattgatggt
gtttctttggaaaaatgggcagaagaaaaaagaacggcttcctataccattgattcagag
agaggaaaaatttatgataaaaatggaatgacgcttgcctatgatcggccaacatttcga
atgtatgcaatcgtggacaaagcgtatacttccaacccagaggagcctaagcatgtagat
gatccggagaaaacggcggagttgctggctcctttattggatttagaagaagaagaaatt
cgttctattattgaggatggaattgaagatgaaaaatttcaggttgaatttggtaaaaag
ggtagagaactttcacaacaaaaaagagatgaaattgctgctctgaagttacctgggatt
aagtttgaaaaggaacccattcgttactatcccaatggagtattcgcttcacacatccta
ggttttgctagagagactgaaaaagagacaaaaaatggtgttaaaagggaaattaccggg
attgctggcatggaaaaggaaatgaatgatctgctgagtggtaaagacggccatatctcg
taccaacgtgacaagtacaataaaaaactgttagaccccaatgaagttattaccaaacct
caagacggagacgatgtttatctcacgatagatcaaaaaattcagactttattagaagat
tcgttaagtcaggtggaagaagaatataatccggagcgaatcactgctgtagtaatgaat
cctaaaactggtgaaatcgttgctatgggaaatcgtcctagttataatccaaacaatcct
tcagatgttgagaattggtataatgatgtagtttctacccctgtagaggcggggtctacg
gttaaaatgtttacatgggcatcagcaattgaagaaggtgtctataacggaaatgagaca
tacaaatccggaagctatcgtcctaacgaacagatccaacctattaacgaccataatggt
ggaagaggttgggatatcataacgtacgatgaaggctttcaaagatcatctaatgttgca
gcagctaagttggcttgggaaaaggtagggacagataaattcttagagtatcttcaggcg
tttggtttagataaagaaactggtattgacttacctaatgaggttgctggaagaattcta
tacaattattccattgaaaaaattacaacctcttttgggcagggaagtaccttgacacca
attcagcaattaaaagctgcttcagctattgctaacgatggtaaaatgatgcagccttat
gttatgaaaaaaatagtaaattcaacgacgggaaaaaatattaaagaaaaatctcctaac
gttgttggcaacccgatttcaaaggaaacttccgataaggttttgaaactattagaatca
gtagtaaatggagaacatgggacaggtaaaatgtaccaaatcaatgattatacggtgggg
gggaaaacaggaactgcacaaatacctaatccagattcaagcaccggagcatatctacgg
ggaaaagagaatcatatattctcttttctaggtatggcacctatagaagaccctcaactg
atgatctatgtatctgtgaaaaaaccagaacttgaaccaacagaaacaggatccatgcca
gtatcatttatatttactaatgtgatggagaatagtttacattatttaaatatagatcca
gataaggatccagaaaagcaaatcaaagagatttccattccggaacttattggtaagcct
gctgacaagatgaggaaaacactctccgataaaggtttacaagtaacggttgcaggaaaa
ggcaaaattacggatgcaagcgttaaacaaggggataaagttttagagaatgatcatatt
atcttaataaccgataagcctacaatgccttctgttattggctggtcactgcgggatgtc
attcagtttgctgaacttcttgaacttaaaatagaaacgtttggtaatggttatagcgta
actcagaatattaaagctggtactccacttaaaaaaggagactacttaggagtagaattt
aagccgccgactaaagagagtgcagaaagtgggagtcaagaagaagaaacctcgggcgca
gattaa
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