Virgibacillus sp. SK37: X953_13405
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Entry
X953_13405 CDS
T03219
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vir
Virgibacillus sp. SK37
Pathway
vir00300
Lysine biosynthesis
vir00470
D-Amino acid metabolism
vir01100
Metabolic pathways
vir01110
Biosynthesis of secondary metabolites
vir01120
Microbial metabolism in diverse environments
vir01230
Biosynthesis of amino acids
Module
vir_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
vir_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
X953_13405
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
X953_13405
Enzymes [BR:
vir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
X953_13405
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
AIF44025
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Position
complement(2480907..2481767)
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AA seq
286 aa
AA seq
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MKIPFTKMHGLGNNYIYIDLFSYKLDESILSELAKAVSNVHTGIGSDGLILIHPSKKADV
GMRIFNRDGSEGQSCGNGLRCTAKYAYEAGIIDKQKFSMETKANIVEAEVMVKDQIVEEV
TINMGAPELQRASIPMLGEAADQVVAESFLVSEEELRLTAVSMGNPHAVFFVEDITHAPL
YDLGPLIEKDSRFPNGVNVEFVEILSGNEINFRVWERGSGVTQACGTGACAAVVAGILND
HLRQGELVTVHLQGGDLKIRWDHHGKVWMTGDAEVIASGFYHYRMA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataccttttacaaaaatgcatggcttaggaaataactatatatatattgattta
ttttcgtataaactggatgaatctattctatctgaacttgccaaggccgtatctaacgtt
catacaggaattggctcagatggcttaatattaattcatccaagcaaaaaggcagatgta
ggtatgagaatatttaatagagacggatccgagggccagagctgtggaaatggcctgcgt
tgcactgcgaaatacgcctacgaagctggtattatagataaacaaaaattctccatggaa
acaaaggcaaacatcgtagaagcagaagtcatggtaaaggatcaaattgttgaggaagtc
acaattaacatgggagctccagaattacagagggcttctatacctatgttaggggaagca
gccgatcaagtcgtggcagagtcatttcttgtttcggaagaggaattgaggcttaccgct
gtttccatggggaatccacatgctgtgtttttcgtggaagatattacacacgccccttta
tatgacctaggtccgcttatagaaaaagattcacgatttcctaatggagtgaatgtggag
tttgtagaaatactttctggaaatgaaattaattttcgtgtgtgggaacgaggatctgga
gtgacacaggcatgtggtactggcgcatgtgctgctgttgtagcaggaatattaaacgac
catttgagacaaggtgaactggtgactgtccatctgcagggtggggatttaaaaatcagg
tgggatcatcatggcaaggtatggatgacaggagacgcagaagtaattgcttcgggattc
tatcattatagaatggcttag
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