Virgibacillus sp. SK37: X953_14975
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Entry
X953_14975 CDS
T03219
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vir
Virgibacillus sp. SK37
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vir03400
]
X953_14975
DNA repair and recombination proteins [BR:
vir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X953_14975
Archaeal homologous recombinant proteins
X953_14975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_16
ABC_tran
AAA_21
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AIF44311
UniProt:
A0A075JQQ2
LinkDB
All DBs
Position
complement(2808622..2811714)
Genome browser
AA seq
1030 aa
AA seq
DB search
MKPLKLTMTAFGPYKRTEIVDFNELEDNRLFVISGNTGAGKTTIFDAICFALYGSASGQD
RENTLMLRSDFAEDDTHTAVELLFELKGRYYRVLRQLGHVKKGNKSKTGDRFEFYEQVEE
REIPCVDRQIVSEIDKKIEMLIGLTQDQFKQIVMLPQGEFRKLLTSQTENKEEILRRLFK
TQTYQHISERLRIRKSKVEEAYNKAVQTRDTYIQHISATLPFREDAQLFQVLGEAHFNEN
QVVAGLEKEIEFYEERIKQDEETYEQAYKLHAQKQVEFSRAEAINKQWEELSDKEAQWKE
LQEKAPQYEEKENKLQQAERATHIYPYEKQRVDLKRDYQQKEQTLQQAQNAEQIAAKKVE
ESLASFQKEEGNQGEREALRKKLDQLYEFLPIVQEIDQTKRLLQQQKQDGKQIAEKIKEA
TAKHQQYKNKRDSYRNEIKVLDQSPNELVKKNNQRNEMLNQYKLVEEFIETKNKQVKLEE
EVQQKQTNYEMRKKKYEKIENTWLNGQASILASHLHEGEACPVCGSEHHPNKAADEEASV
TKEELENARKELEKIDEIYRTSVADWKAVKAQYEKRAADLSEINIPVNEAEEAKETILQQ
GRQLKKDIINLEAATEKVKQLKEELEKTEQHIEQVTEQEEKLEKQYQELNEKYNTTYAVY
QERIGKIPEQIRQLSELRQAITEAEKKKEKMEEAWDKVQRELQKAKEEQTKVNTDLIHAT
NQLEETKRKQLDAEREWNNALDQAGFIDTKAYEEAKMSEIARKEAKREIEEYKQKRVTLQ
YRVDELKAALKDKKQLDLSLLEAQLQELKSAYETALKTVQQTKEWYKEAQQLKENILKSN
EQVRKIDQQLGTVSDLFNVVRGQNDRKISFERYLQIEYLEQIIDVANQRLRRLSNGQFQL
IRSDRQESHGRQSGLALDVYDAYTGQTRDVKSLSGGEKFNASLCLALGMSDVIQSFQGNI
TIDTMFIDEGFGTLDEESLNKAIDTLVDLQQSGRMIGVISHVQELKAIFPAILEVKKTKE
GSSETAFVLK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaagccattaaaattaacgatgacggcatttgggccgtataagagaacggagattgtt
gattttaacgaattagaagataatcgtttatttgttatttccggcaataccggggcagga
aaaacaacaatctttgacgccatttgttttgctttatatggaagtgcaagtggacaagac
agggaaaacaccttgatgttacgaagtgattttgctgaagatgatacacatactgcggtt
gaattgctttttgaattaaaaggtcgttattaccgggttcttcgtcagcttggtcatgtt
aaaaaaggaaacaaatccaaaacaggggatcgctttgaattctatgaacaagtggaagaa
agagagattccttgcgtagacaggcaaattgtttcggaaatagataaaaagatagagatg
ttaattgggcttactcaggatcagttcaaacaaatcgttatgcttccccaaggagagttt
cgaaagttattgacttcgcaaactgaaaataaagaagagattttaaggagactttttaaa
acacaaacctatcaacatatcagtgaacggttacgtatacgaaaaagcaaagtggaggaa
gcgtataataaagcagtgcaaaccagagatacatatattcagcatattagtgctacgctc
ccttttcgagaagatgcacaactttttcaggtcttgggtgaagcgcattttaatgaaaat
caagttgtagctggtttagaaaaagaaattgagttttacgaggaacggattaaacaagat
gaggaaacatatgaacaggcgtacaagctacatgcacaaaaacaggtagaattttcccgt
gcggaagcaattaataagcagtgggaagaactgtcagacaaagaggctcaatggaaggaa
ttgcaggaaaaagcacctcaatatgaagaaaaggaaaataaacttcaacaagctgaacgg
gctacacatatttatccatatgaaaaacaacgtgttgatttaaagagagattatcaacag
aaagaacaaacactgcaacaagcccaaaacgcagaacaaattgctgctaaaaaagtagag
gaatctcttgcttcttttcaaaaggaagaaggtaaccaaggggaacgggaagcgcttcgg
aaaaagcttgatcagttatatgagtttttgccaattgtacaagaaatagatcaaacaaag
cgattattacagcaacaaaagcaagatggaaagcagatagccgaaaaaattaaagaagct
actgcaaaacatcagcagtataaaaataagcgagattcttacagaaatgagataaaggta
ttagatcaatccccaaacgagttagtaaaaaagaacaatcaacgaaatgaaatgttgaat
caatataaattggttgaagagtttattgagacgaaaaataaacaggtgaaattggaagag
gaagtccaacaaaagcaaactaattatgaaatgagaaagaaaaaatatgagaaaatagaa
aatacgtggctgaatggtcaagcaagcatacttgcaagccatctccatgaaggtgaagct
tgtcccgtttgcggaagtgagcaccatccgaacaaagcagctgatgaagaagctagtgta
acaaaagaggagttggagaatgctcgcaaggaacttgaaaaaatagatgaaatttatcgc
accagtgttgccgattggaaagctgttaaagcacagtatgaaaaaagagctgcagattta
tctgaaattaatattcctgtaaatgaggcggaagaagcaaaggaaactattttgcaacag
ggccgccaactaaaaaaggatattataaatttggaagctgcaacagagaaagttaaacag
ctaaaagaagagttggaaaaaacggagcaacatattgaacaggtaaccgaacaggaagag
aagctggagaaacaataccaggaattaaatgaaaaatataatactacttatgcagtttat
caagaacgcattggtaaaatccctgaacaaattcggcagctttctgaactaagacaagct
attaccgaggccgaaaagaaaaaagagaaaatggaagaagcgtgggataaggttcagcga
gagcttcagaaggcgaaagaagagcagacgaaggtaaatacggatttaatccatgcaaca
aatcaacttgaagagacaaagagaaagcaactagacgctgaacgtgaatggaacaatgcg
cttgaccaagcaggttttatagacacaaaagcgtatgaagaggcgaagatgtcggaaatt
gctcgtaaagaagcaaagcgggagatcgaagaatacaaacagaaacgggtaaccctccaa
tatcgagtagatgaattgaaagcagcattgaaggacaaaaagcaattggatctttctttg
cttgaagctcaacttcaagagcttaaaagcgcttatgaaacagcactgaaaacagtacaa
cagacaaaagaatggtataaggaagcgcaacaacttaaagaaaatatattaaaatcaaat
gaacaagttcgaaagatagaccaacaactgggtacagtttctgatttgtttaatgttgtt
cgtggacaaaatgaccgtaaaatatcattcgaacgatatttgcaaattgaatacctcgaa
caaattattgatgttgcgaatcagcgtttgcggaggttatccaatggacaatttcaacta
attcgcagtgaccggcaggaatcacacggaagacaaagcggattagccctcgatgtttat
gatgcttatactggccaaacaagggatgtgaaatcattatctggaggagaaaaatttaat
gcttcgctatgtctagcactcggtatgtcagatgttatccagagttttcaaggaaatata
acgattgacacgatgtttattgatgagggatttggtacgttggatgaagaatcacttaat
aaggcaatagatacattagttgatttacaacagtcaggcagaatgattggagttatctca
catgtacaggaactaaaagcaattttccctgcaatactggaagtgaaaaaaactaaagaa
ggctcaagtgaaactgcttttgttttaaagtaa
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