Virgibacillus sp. SK37: X953_16595
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Entry
X953_16595 CDS
T03219
Name
(GenBank) polysaccharide biosynthesis protein EpsC
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
vir
Virgibacillus sp. SK37
Pathway
vir00541
O-Antigen nucleotide sugar biosynthesis
vir00552
Teichoic acid biosynthesis
vir01100
Metabolic pathways
vir01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
X953_16595
00552 Teichoic acid biosynthesis
X953_16595
Enzymes [BR:
vir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
X953_16595
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
RmlD_sub_bind
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
PglD_N
NAD_binding_10
KR
adh_short
GFO_IDH_MocA
Pyr_redox_2
ApbA
Motif
Other DBs
NCBI-ProteinID:
AIF44556
UniProt:
A0A075JRC0
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Position
complement(3172224..3174053)
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AA seq
609 aa
AA seq
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MTYRTRLTLLIILDSLIVSTAIFIASWIVYPSTNVSQLDAIIISAIALLVFHHLFAFIYK
LYNKVWAYASIGELIAIVKAITLSIIAAGIVQYLFNDFAIYRRALLITWMLHITLIGGSR
FLWRIYRDRYIAKAENQKRTLIVGAGSAGAMIARQLKNDHNNQELLPVAFVDDDINKQKM
QLFGLPVAGTVKEIPNIVKNLEIQHIVIAIPSLKNGALEKIVEQCNKTTAKVQMIPKIED
LMTGRVSVSHLKNVEVEDLLGREPVKLDIDAISEYVTDNTVMVTGAGGSIGSEICRQIMK
FNPGKIVLFGHGEFSIYTIDMELRNRYKDANIEIVPVIGDVQDRDRVFEVIKEQQPTIIY
HAAAHKHVPLMEYNPHEAVKNNIVGTKNVAEAADTFGVSTFVMVSTDKAVNPTNVMGATK
RVAEMVVQDMARKSKTKFVAVRFGNVLGSRGSVIPLFKKQIEQGGPVTVTDPEMTRYFMT
IPEASRLVIQAGTLARGGEIFVLDMGEPVKIVDLARNLIKLSGYSEEEIPIQFSGIRPGE
KMYEELLGEDEVHPDAVFEKIYVGRTMDVDAALFLDLIDRFEGYDAVELKDKLMGIVFME
KTLMSVKGS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
ttgacttatcgaacaagactgacattgttgatcattctcgactccctgatcgtcagtacc
gcgatttttatcgcatcttggattgtatatccttcgacaaacgtttcacagcttgatgcg
atcattattagtgcaatagctctattagtctttcatcatcttttcgcatttatttataag
ctgtataacaaagtatgggcctatgcgagtattggagaattaatagcgattgtaaaggcc
attacactgtcgattattgcggcagggattgtgcaatatctgtttaatgactttgcgatc
tatcgtagagcattacttattacgtggatgctgcatattaccttaattggcggatcgcgc
tttctatggcggatttatcgtgatcgttacattgcaaaagcggaaaatcagaagcgtacc
ttaattgtaggtgccggatcggcgggagcaatgattgcgaggcaactgaagaatgatcat
aacaatcaggaattgttaccagtggctttcgtagatgatgacataaataaacaaaagatg
caattgtttggtcttccggtagcaggtactgtgaaagaaattccgaacattgtaaaaaat
ctggagatccagcatatcgtaattgcgattccttccttaaagaatggcgcattggagaaa
attgtggaacagtgtaataaaacaacagccaaggtgcagatgatcccgaaaattgaggat
ttgatgacaggtagagtatctgtcagccatttgaaaaatgtcgaggtagaggatctgctt
gggcgtgagcctgtgaagctggatattgacgcaatctcggaatatgtgacagacaatacg
gtaatggtgaccggagcaggtggctcgatcggttcagaaatctgccgacagatcatgaaa
ttcaatccaggcaaaattgtgctattcggacatggcgaatttagcatttatactattgat
atggaattacgtaatagatacaaagatgccaatattgaaatcgtgcctgttatcggggat
gttcaggatcgtgaccgtgtatttgaagtcatcaaagaacagcaaccgacaatcatttat
catgcggctgcacataagcatgtgccattaatggaatataatccgcatgaagcagtgaaa
aacaatatcgtcggtacgaaaaatgtcgcagaagctgccgatacatttggtgtcagcact
tttgtaatggtttcgacagacaaagcagtgaatccgacaaacgtgatgggagcaacgaaa
cgtgttgccgaaatggttgtccaagatatggcgagaaaaagtaagacgaaatttgtcgca
gtaagattcgggaatgtacttggaagtcgaggtagtgtcattccactattcaaaaaacaa
attgaacaaggtggcccagtaacagttactgacccggaaatgacgcgttactttatgaca
attccagaagcatcaagattggtaatccaagcagggacgctggcaagaggtggcgagatc
tttgtcttggatatgggtgagccagtgaagattgtcgatctggcaagaaacctaataaaa
ctatcaggctactcagaagaagagattccgattcagttctcaggtatcaggcctggggaa
aagatgtatgaagagctgcttggtgaggatgaggttcatcctgatgcggtttttgagaaa
atttatgttggtcggacgatggatgtggatgcggcgttgttccttgatttgattgatcgg
tttgagggatatgatgcggttgagttgaaagataagttgatgggtattgtgtttatggag
aagacgttgatgagtgtgaaggggagctag
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