Virgibacillus sp. SK37: X953_17610
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Entry
X953_17610 CDS
T03219
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
vir
Virgibacillus sp. SK37
Pathway
vir03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
X953_17610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vir03400
]
X953_17610
DNA repair and recombination proteins [BR:
vir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
X953_17610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Prok-RING_4
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
AIF44717
UniProt:
A0A075JT70
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Position
complement(3402313..3403170)
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AA seq
285 aa
AA seq
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MHTMWKGTISFGLVNIPVKMHAATENKDVKLRQLHKECQSPVKYEKVCPVCDRKVENEEI
VKAYEYAKNKFVILDDEELEALQKEQADKAVEIVDFVKLEEIDPIYFEKSYYLSPNEGGG
KAYGLLRSALKDTGKIGVAKMIIRSKEQLAVIRVYENTLIVETIHYPDEVRSVQDVPNVP
EEVAVAKKELDTAKMLIDQLTAEFDPEKYKDEYRTALLDLIEDKKNNEQTTTAKDVSTRP
ATATGADNLMDALQASLERAKKEKPKPKQPKRKTKTTTQKKKTAT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaatgtggaagggcaccataagtttcggattggtgaacataccagtaaaaatg
catgcagcaacagagaataaggatgtgaagcttcgtcagcttcataaggagtgccaatca
cctgtgaaatatgagaaggtttgtccggtttgtgatcgaaaggtagagaatgaggaaatt
gtgaaggcatatgaatacgctaaaaataagtttgtgattttagatgatgaagaactggaa
gcattgcaaaaggaacaggccgataaagcagttgaaattgtagattttgtaaagctggaa
gaaattgatccgatctatttcgaaaaaagctattacttatcaccaaatgaaggtggcggg
aaggcatacggtttattacgaagtgctttgaaagacaccgggaaaattggcgtagcgaaa
atgattatccgttcaaaagagcagcttgctgtgatccgtgtatacgaaaatacacttatt
gtagagacgattcactatcctgatgaagtccggagtgtacaagatgtgccaaacgtgcct
gaagaagtagctgtcgcgaaaaaagaactcgacactgcgaaaatgttaattgatcagtta
acagctgagtttgatcctgaaaaatataaagatgaatatcgcaccgcattgcttgattta
attgaagataagaaaaataatgagcaaacaactacggcgaaggatgtaagtacaagaccg
gctacagccacaggtgctgataatttaatggatgcactgcaagcctctttagagcgagct
aaaaaagaaaaaccgaagccaaaacaaccaaaacgtaaaacaaaaacaacaacacagaaa
aagaaaacagcaacgtaa
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