Vibrio sp. STUT-A16: VspSTUT16_00250
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Entry
VspSTUT16_00250 CDS
T10420
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00730
Thiamine metabolism
vis01100
Metabolic pathways
vis01240
Biosynthesis of cofactors
Module
vis_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VspSTUT16_00250 (thiC)
Enzymes [BR:
vis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VspSTUT16_00250 (thiC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
PepSY
Motif
Other DBs
NCBI-ProteinID:
BDR16679
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Position
1:34008..35948
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AA seq
646 aa
AA seq
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MSSRKQARLEAKQFIETLSVQPYPNSTKVYVEGSRPDVRVPMREIALADSLIGGTKESPI
FEPNEPVRVYDTSGVYTDPEHTIDLYSGLPKLRESWIEERGDTELLDEVSSVYTKERLKD
ETLDDLRYGNLPRIRRAKDGQCVTQLHYARKGIITPEMEFIALRENMGRAKYRDDVLNQQ
HPGQSFGANLPKDITAEFVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VTSSIEEEVEKLVWATRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
AHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSVADANDEAQFAELRTLGELTKVAW
EYDVQVIIEGPGHVPMHMIKENMEEQLEHCHEAPFYTLGPLTTDVAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKVGMITYKLAAHAADLAKGHPGAQVRDNALSKAR
FEFRWEDQFNLSLDPETARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKDT
EQVAADQAISIKMLDDPLEGMRQKSQEFRESGSELYHPAAHAEVSD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgcaaacaagcgagactggaagcaaaacagttcattgaaacactctcggta
cagccgtacccaaattccacaaaagtatatgtagaaggttcacgtccagatgttcgtgta
cctatgcgtgaaatagcgctagcagatagtctgattggtggaacaaaagaatcgccaatc
ttcgagcctaatgagccagtacgcgtttacgatacctctggtgtatacacagacccagaa
cacaccatagacctttatagtggcctaccaaagctaagagaaagctggattgaagaacgc
ggtgacacagagttactcgatgaagtaagctcggtgtacaccaaagaacgcttaaaagac
gaaacactagacgatcttcgttacggtaatctaccacgtattcgacgtgccaaagatggg
cagtgcgtgactcaactgcactatgctcgcaaaggtattattaccccagaaatggaattc
atcgcgctgcgtgaaaacatgggtcgtgccaagtaccgtgatgatgtgctgaatcaacag
catcctggtcaaagctttggagcgaatcttccaaaagacattaccgccgagtttgttcgc
aaagaagttgccgaaggtcgcgcgattatcccttctaatatcaaccacccagaatccgaa
ccaatgatcattggacgtaactttttggtcaaagtgaacgctaatatcggtaactcatcg
gtgacgtcttcgattgaggaagaggttgagaagctagtgtgggcgacacgctggggtggc
gatactgttatggatctctccacaggtcgcaatattcatgaaactcgagaatggattctg
cgtaacagcccggttccgatcggtaccgtacctatgtatcaagcgcttgagaaagtgaat
ggagttgccgaaaaccttaactgggaagtgatgcgcgatactctgattgagcaagcagaa
cagggcgttgattacttcactatccatgccggtttactacttcgctatgtgccaatgact
gcaaagcgtgttactggcatcgtctctcgtggtggttctatcatcgcgaaatggtgttta
gcgcatcaccaagaaagcttcttatacacccacttccgagagatctgtgaaatctgtgcc
aagtatgatgtggcactttctctcggtgatggtctgcgccctggttcggttgccgatgct
aatgatgaagcgcaatttgcggagcttcgtactcttggtgagttgactaaggttgcgtgg
gaatacgacgtacaggtgattatcgaaggtcctggccatgttccaatgcacatgatcaaa
gagaacatggaagagcagctagagcactgccatgaagctccgttctacacccttggtcca
ctgacgacagacgtcgctcctggttacgaccatattacgtcaggtattggcgctgccatg
attggctggtatggctgtgcgatgctttgttacgtaacacctaaagagcatcttggctta
ccaaacaaagaagacgtgaaggtaggcatgatcacttacaagcttgctgctcacgctgct
gatttggctaaagggcaccctggcgcacaagttcgtgataacgcgctttctaaagcacgt
tttgaattccgctgggaagaccaattcaacttgtcactcgacccagaaactgctcgcgct
ttccatgatgaaaccttgcctcaagagtcgggaaaagttgctcacttctgttcgatgtgc
ggaccaaagttctgctcgatgaagatttcgcaagaggtacgagagtacgcgaaagacact
gagcaagttgctgcggaccaagctatctcgatcaaaatgcttgatgatcctcttgagggg
atgcgtcagaaatcgcaagaatttagagagtcaggttctgagttataccacccagcagca
catgccgaggtaagtgactaa
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