KEGG   Vibrio sp. STUT-A16: VspSTUT16_01090
Entry
VspSTUT16_01090   CDS       T10420                                 
Symbol
hsdR
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vis  Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:vis00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vis02048]
    VspSTUT16_01090 (hsdR)
Enzymes [BR:vis01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     VspSTUT16_01090 (hsdR)
Prokaryotic defense system [BR:vis02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   VspSTUT16_01090 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N HSDR_N_2 T1R_D3-like DUF4119
Other DBs
NCBI-ProteinID: BDR16763
LinkDB
Position
1:complement(130304..132619)
AA seq 771 aa
MSSEADTRANYIDPALKAAHWQPGNIIREHYFTDGRKLAGGVRGRRCFVDYLLHKDNRYL
AVVEAKKESEHPTKGLQQAIDYAKKLLVRFVYSSNGKQTYEFDLETGKGDYIEFYPTPQE
LENRYAGVNSDLGQQLRNVPFHLEGAMQPRYYQELAVHAATDAIGKGKPRVLLTLATGTG
KTFIAFQIVHKLFQSRWNKKTPGSRRPRILFLADRNILADQAINTFNPYEKDLIKINGEE
VRKRGGVVPTNAHIFFAIYQAIAERENIEGYYKEYPSDFFDLVMIDECHRGSANETGSWR
AILDHFGSAVHVGLTATPKREANVDTYDYFGTPAFEYSLKDGINDGFLTPYRVKRVRTNL
DELVLTKDDQVIEGESGQDVYQVEDYDKKIIVDERTELVAKAILENINSLEKTIVFCENQ
NHALTMRDMINKHKKVKDPHYCVRVTSDEGKVGRELLEKFQDNDKDIPTIITSSQMLTTG
VDARNVRNVVLDRTVGSMVEFKQIVGRGTRVFDGKDYFTIVDFRGATNKFYDKDWDGEPE
APEPGGTGEPKPPPYTPEPPGGTDDPEPEPGETKPRLKVKLGKHRELKVIDVETRYIDEN
GKPLTVQEFVERLITQLPGLFKSVEELRRIWSDPDERETLLNKLVQAGFDKEQLATLRRM
FEAEECDIFDLLAFLAFEQPMATRKARADQVRTNSTFFNQYQQEKAQQFLHFVLNRYEQT
GSSELSRERLPALIELSGLGTVKDASTAFGGKPAYLLAAFKQLQQQLYHVN
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgtcgtcagaagcagataccagagcaaactacatcgatccagcgttaaaagccgcacat
tggcaaccgggcaacatcattcgggaacattactttaccgatggccgtaagcttgctggc
ggtgtccgtggtcgtcgttgcttcgtcgattatctgctccacaaagacaatcgttacctt
gcagttgttgaagcaaaaaaagaatcagaacatccaaccaaaggccttcaacaagccatc
gactatgccaagaagctactcgttcgctttgtctattcaagcaacggtaaacaaacctat
gagttcgacttagaaactggcaaaggcgactacatcgagttttacccaacaccacaagag
cttgaaaaccgctacgcgggtgttaattcggatctaggccagcaacttcgtaatgtgccc
tttcatttagaaggcgcaatgcagccgcgttattaccaagaattagcggtccatgccgcc
acagatgccattggtaaaggtaagcctcgcgtgctgttaacgctggcgacaggtacaggt
aaaacgtttattgccttccaaatcgtccataaactgtttcagtcccgttggaacaaaaaa
acaccaggtagtcgacgaccacgaatattgtttttggctgatcgcaatattttggccgac
caagctatcaatacttttaacccctatgaaaaagaccttattaagataaatggggaagag
gtacgcaagcgtggcggtgtagtgccaaccaatgcacatatcttttttgctatctaccaa
gccattgctgagcgtgaaaacattgaaggctattacaaagagtatccaagtgatttcttt
gaccttgtaatgattgacgagtgtcatcgtggcagtgctaatgagacaggctcttggcga
gccatactcgatcattttggcagtgcagtgcatgtaggtttaacagccacaccaaaacgt
gaagctaatgtggatacctatgattactttggaactcctgcatttgaatactcattaaaa
gacggtatcaacgatggctttttaacgccatatcgtgttaagcgggtacgtaccaactta
gacgagctcgtgctgaccaaagatgaccaagtgatcgaaggtgaatcagggcaagacgtc
tatcaggtagaagattacgacaagaagatcattgttgatgaacgtaccgagctggtcgca
aaagccattttggaaaatatcaattcactagaaaaaaccatcgtcttttgcgaaaaccaa
aatcatgctctcaccatgcgcgacatgatcaataaacataaaaaagttaaagacccacac
tactgcgttcgtgtaaccagtgacgaaggtaaagttggccgcgagctactggaaaaattc
caagataatgacaaagatatccccaccattattacctcatcgcaaatgttaaccacgggg
gtagacgcccgtaatgtacgtaacgtagtgctggatagaaccgtcggctcaatggtggaa
tttaaacaaattgtcggtcgcggcacccgcgtttttgatggcaaagactatttcaccatt
gtcgattttcggggtgcaaccaataagttttatgacaaagattgggatggcgagcctgaa
gcaccagagcccggtggcacaggggagcctaaaccaccgccatacacaccagaaccaccc
ggaggaacagatgacccagaacctgaaccgggtgagacaaaacctcggttgaaagtaaag
ctcggcaaacaccgagaactgaaggtcattgacgttgaaactcgttatatcgatgaaaac
ggtaaacctctcactgtgcaagaatttgttgagcgtttgatcacccaattaccagggttg
tttaaatcagttgaggaattgcggcggatatggtcagacccagatgagcgcgaaaccttg
ctcaataaacttgtacaagcaggttttgataaagaacagctcgccactctgcgacgcatg
tttgaagcagaagagtgcgatatcttcgatctgctggcttttttagcctttgaacagcca
atggcaacccgtaaagctcgtgccgatcaagtacgcactaacagcaccttctttaatcag
taccaacaagaaaaggcacagcagtttttgcactttgtgctcaatcgttatgagcaaact
ggcagctcagagttatcacgcgagcgcttgcctgctctcatcgagctatcaggcttaggt
acagtgaaagacgcctcaacagcattcggtggaaagccagcctatttactggctgctttt
aaacaattacagcaacagctataccatgtgaactaa

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