Vibrio sp. STUT-A16: VspSTUT16_01650
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Entry
VspSTUT16_01650 CDS
T10420
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis03030
DNA replication
vis03430
Mismatch repair
vis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VspSTUT16_01650
03430 Mismatch repair
VspSTUT16_01650
03440 Homologous recombination
VspSTUT16_01650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vis03032
]
VspSTUT16_01650
03400 DNA repair and recombination proteins [BR:
vis03400
]
VspSTUT16_01650
Enzymes [BR:
vis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VspSTUT16_01650
DNA replication proteins [BR:
vis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VspSTUT16_01650
DNA repair and recombination proteins [BR:
vis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VspSTUT16_01650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BDR16819
LinkDB
All DBs
Position
1:complement(216929..217558)
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AA seq
209 aa
AA seq
DB search
MNWLQRKYWHYKLKGSPYQSLFCTPDKTEYVSLDCETTSLDPNRAELVTIAATKIIDNRI
ITSQPFEVRLRAPQSLDSGSVKIHRIRHQDLVDGISEKEALLELLDFIGNRPLVGYHIRY
DKKILDLACLRQLGFPLPNPLIEVSQIYHDKLERHLPNAYFDLSLDAICKHLELPIQDKH
DALQDAISAALVFVRLTKGDLPNLTAPYT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaactggttacaacgcaaatactggcactacaaactgaaaggctctccttatcagtcg
cttttttgcacgcccgataaaacggaatacgtttcgctcgactgcgaaaccaccagcctt
gatccaaatcgcgccgagttggtgaccattgcggccacgaagatcatcgacaaccgcatc
atcactagccagccatttgaagtccgcttacgcgcgccgcaatcgctcgattctggctca
gtcaaaattcatcgaattcgccaccaagacttagtcgacgggattagcgaaaaagaggcg
ctgctcgagctgctcgacttcatcggcaaccgaccacttgtcggttatcacattcgttac
gataaaaagatcttagatcttgcttgtctgaggcaacttggctttccacttcctaacccg
ctcatcgaggtaagtcagatttatcacgacaagctggaaagacatttgccgaatgcctat
ttcgacttaagtctggatgcgatttgtaaacacctcgaacttcctatccaagataaacac
gacgctttacaagatgcgatttctgccgctttggtctttgttcgcttaacgaaaggcgat
ttgcccaacctaaccgcgccgtatacataa
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