Vibrio sp. STUT-A16: VspSTUT16_03410
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Entry
VspSTUT16_03410 CDS
T10420
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vis03019
]
VspSTUT16_03410
03009 Ribosome biogenesis [BR:
vis03009
]
VspSTUT16_03410
Messenger RNA biogenesis [BR:
vis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VspSTUT16_03410
Ribosome biogenesis [BR:
vis03009
]
Prokaryotic type
rRNA processing factors
VspSTUT16_03410
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Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BDR16995
LinkDB
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Position
1:430742..432211
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AA seq
489 aa
AA seq
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MSAELLLNVTPSETRVAMIEGGVLQEIHIERESRRGIVGNIYKGKVSRVLPGMQAAFVDI
GLDKAAFLHASDIVPHTECVAENEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESEKERERLKKVVNHYCDEHGGFIIRTAAEGADEK
ELSQDAAFLKRLWLKVMERRSKYKTRSTLYGELGLAQRILRDFVGTELDKIMVDSRLEYE
NLKEFTSEYVPELTDKLELYEGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEAM
TTIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASEEHRQRV
LTSLETALAKDRVKTNINGFTQLGLVEMTRKRTRESIEHILCSGCPTCEGRGSVKTVETV
CFEILREITRVNRAYDADNFVVYASPFVAEALLGDESHALAELEVFIGKQVRVQAEPLYI
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagaattgctgcttaacgtgaccccgagtgaaactcgtgtggccatgattgaa
ggtggagtactacaagaaatacatatcgagcgcgaatcgcgtcgcggcattgtgggcaat
atatacaaaggcaaagtcagccgagtactgccaggtatgcaagcggctttcgtcgatatc
ggtttagataaagcggcgtttttacatgcgtcagatattgtcccgcataccgaatgtgtg
gcagagaacgaaaaacagcagtttcaagtccgtgatatctctgagctggtacgtcaggga
caagacattgttgtacaagtggtcaaagatccgctcggcacgaaaggcgcgcgtttaacg
acggatatcaccttaccttcacgttatcttgtctttatgccgggggccagccatgttggt
gtctcgcagcgtattgagagtgagaaagagcgcgagcgtctgaaaaaagtggtgaaccat
tactgtgatgagcacggtggttttatcattcgtaccgcagcggaaggcgcagatgaaaaa
gagctttctcaagacgcggcatttcttaagcgcttgtggctaaaagtcatggagcgtcgt
tcaaaatacaaaacgcgttcaacgctttacggtgaacttggtttagcccagcgcattcta
cgtgattttgtcggcacagagctcgataaaatcatggtcgactcccgcctcgaatatgaa
aacctgaaagaattcacttctgagtatgtacctgagctaacagacaagcttgagctttac
gaaggtgacaagccaatctttgacatgtacgacaccgagaatgaaattcagcgttcttta
gagcgcaaggtggagctaaagtcgggtggctatttgatcattgatcaaactgaagctatg
acaactatcgacatcaacactggtgcatttgttggtcgtcgtaatctcgaagagactatc
tttaataccaacattgaggcaacgcaagctattgctcgtcagctgcgtttgcgcaatctc
ggcggcatcatcattatcgactttatcgatatggcgtctgaagagcaccgtcagcgagtg
ctcacctcattggaaaccgcactggctaaagaccgagtaaaaaccaacatcaacggcttt
actcagctcggcttagtcgagatgacgcgtaagcgcacacgagaaagtattgaacatatc
ttgtgttctggctgtcctacttgtgagggccgtggtagcgtgaaaacggttgaaactgtg
tgctttgagatattacgcgagattactcgtgtaaaccgtgcttacgacgccgataatttt
gttgtgtacgcatcgccgtttgttgctgaagcgctgttgggtgatgagtctcatgcattg
gctgagctcgaagtatttattggcaagcaagtgcgagttcaggctgagcccctgtacatt
caggaacagtttgacgtcgtaatgatgtaa
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