Vibrio sp. STUT-A16: VspSTUT16_04000
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Entry
VspSTUT16_04000 CDS
T10420
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VspSTUT16_04000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vis03400
]
VspSTUT16_04000
Enzymes [BR:
vis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
VspSTUT16_04000
DNA repair and recombination proteins [BR:
vis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VspSTUT16_04000
Prokaryotic type
VspSTUT16_04000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDR17054
LinkDB
All DBs
Position
1:complement(504189..505265)
Genome browser
AA seq
358 aa
AA seq
DB search
MTPFANAILEWYDAYGRKDLPWQQNKTAYSVWLSEIMLQQTQVTTVIPYYQRFLERFPTV
IDLANAEQDEVLHLWTGLGYYARARNLHKAAQEVASTYNGEFPLDIEKMNALPGIGRSTA
AAVLSSVYKQPHAILDGNVKRTLSRCFAVEGWPGQKKVENQLWEIAETHTPQTDVDKYNQ
AMMDMGAMVCTRSKPKCSLCPVADLCVAKQQGNVLDYPGKKPKKDKPIKQTRFVMLHHNT
ENGHEVWLEQRPQTGIWGGLFCFPQTEHVDVESDIELLLDQRGIQASNIKQQQTLITFRH
TFSHYHLDITPILIDLSKQPDVIMEGNKGLWYNLSKPEEVGLAAPVKLLLEALPHELR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgacacctttcgccaatgccatcctagaatggtatgacgcatatggaagaaaagatctt
ccgtggcaacaaaataagaccgcatacagtgtctggttgtctgaaatcatgcttcagcaa
actcaggtcactacggttattccgtattaccaacgtttcttggagcgttttccaaccgtg
atcgatcttgccaatgctgagcaagatgaagtcctgcacctttggactggcttagggtat
tacgcccgagcccgtaaccttcacaaagcagcacaagaggtcgcctctacatacaatggt
gagtttcctcttgatatagagaaaatgaacgccttaccggggattggccgctctaccgca
gccgccgttttatcgtctgtgtataaacaaccacatgcgattcttgatggcaacgtgaag
cgcaccctatcccgctgtttcgcagtcgaaggatggccaggacaaaaaaaggttgaaaac
cagctgtgggaaattgccgaaacgcacaccccacaaacggacgtagataagtataaccag
gcaatgatggacatgggcgcaatggtctgcacacgcagcaaacccaaatgtagcctctgc
cctgttgcggatctgtgtgtggcaaaacaacaaggcaatgtgctcgactacccgggtaaa
aaaccgaaaaaagacaagccaatcaagcaaactcgttttgtaatgcttcaccacaacacc
gaaaatggtcatgaggtgtggttagaacaaagaccacaaacaggcatttggggtggctta
ttttgcttcccacaaaccgaacatgtggatgtagaaagcgacattgaattgctactggat
caacgtggcattcaagccagcaatatcaagcagcagcaaacactgattacctttcgtcat
acattcagccattaccacctagatatcacgccaattttgattgatttatcaaagcaaccg
gacgtgataatggaaggcaacaaaggtctttggtataacttatctaaacctgaagaagtc
ggtttagccgcgccagtaaaactattgctggaagcgctaccccacgaacttcgttaa
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