Vibrio sp. STUT-A16: VspSTUT16_04640
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Entry
VspSTUT16_04640 CDS
T10420
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00900
Terpenoid backbone biosynthesis
vis01100
Metabolic pathways
vis01110
Biosynthesis of secondary metabolites
Module
vis_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
VspSTUT16_04640 (ispF)
Enzymes [BR:
vis01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
VspSTUT16_04640 (ispF)
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Motif
Pfam:
YgbB
DUF6630
Motif
Other DBs
NCBI-ProteinID:
BDR17118
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All DBs
Position
1:569599..570075
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AA seq
158 aa
AA seq
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MIRIGHGFDVHKFGGEGPVIIGGVAIPYEQGLVAHSDGDVALHALTDALLGAIAAGDIGR
HFPDTDDKWKGANSRELLKDVYRRVKEQGYRLGNADVTIMAQAPKMAPHIDAMCAAIAED
LETDISNINVKATTTERLGFTGRKEGIATEAVVLLFKQ
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgattcgaattggtcacggttttgacgtgcataaatttggtggtgaaggcccggtcatt
atcggtggtgttgctatcccttacgagcagggcttagtagcccactcagatggtgatgtt
gctcttcatgctttgactgatgcgctgcttggcgcgattgctgcgggtgatattggtcgt
cacttcccggataccgacgataaatggaaaggggctaatagccgcgaattgttgaaagac
gtttatcgtcgtgtcaaagagcaaggctaccgccttggtaatgccgatgtcaccatcatg
gcacaagcacctaagatggcacctcatattgacgcgatgtgtgcggcgattgcggaagac
ctagaaaccgatattagtaacattaacgtaaaagcgacgacgacagagcgtctcggtttt
actggacgcaaagaaggcattgcaacggaagccgtggtgcttctgttcaagcaataa
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