Vibrio sp. STUT-A16: VspSTUT16_05710
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Entry
VspSTUT16_05710 CDS
T10420
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vis03016
]
VspSTUT16_05710 (truB)
Enzymes [BR:
vis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VspSTUT16_05710 (truB)
Transfer RNA biogenesis [BR:
vis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VspSTUT16_05710 (truB)
Prokaryotic type
VspSTUT16_05710 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BDR17225
LinkDB
All DBs
Position
1:702016..702969
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AA seq
317 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPIDVTLDKLEACIEKFRGESEQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYEKMVTLEQLNELLEQAHREERAPRELLDPLL
LPMDTAVEDLPEVNLVPELADMVQHGQPVQVFGAPTEGSLRLTMGEERLFIGVGEMNEDG
KIAPKRLVVFRDDVASK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaattaatggcgttatactgttggacaaaccaaca
ggcatctcttccaatgatgcactgcaaaaagtaaagcgaatctactttgctgagaaagca
ggccacactggtgccttggacccattagcgacaggcatgctgccaatttgcttgggtgaa
gcgacgaagttttctcagtttcttctagattctgataaacgctaccgtgtgatcgcaaag
cttggtgaacgtaccaacacgtctgactcggatggtgaagtcgtagagacacgtccaatc
gatgttacgttagacaagctagaagcgtgcattgagaagttccgtggcgaatctgaacaa
gtaccttccatgttttcagcgttgaaatatcaagggaaacccttgtatgaatacgctcgc
aaaggcatcgaagttccgcgtgaatctcgtaagatcacggtatacgagattgttcttcac
cgttttgaaggcgatgaagtcgagatggaagtgcactgctcaaaaggcacatacattcgt
accatcgtggatgatctaggcgaaatgttaggttgtggtgcgcacgtaactatgcttcga
cgcactggtgttgcgaaatacccttacgagaagatggtgacacttgagcaactgaatgag
ttactagagcaagcacaccgtgaagaacgcgctcctcgagaactactggacccattgctg
ttaccaatggatacagcggtagaagacttaccagaagtcaacttagtgcctgaactggcg
gatatggttcagcatgggcaacctgttcaagtatttggtgcgcctaccgaaggctcactt
cgccttaccatgggtgaagagcgtttgtttattggcgttggcgaaatgaacgaagatggc
aaaatcgctcctaagcgattggtcgtattccgagatgacgtcgcatccaagtaa
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