Vibrio sp. STUT-A16: VspSTUT16_06790
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Entry
VspSTUT16_06790 CDS
T10420
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VspSTUT16_06790 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vis03400
]
VspSTUT16_06790 (recC)
Enzymes [BR:
vis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VspSTUT16_06790 (recC)
DNA repair and recombination proteins [BR:
vis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VspSTUT16_06790 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BDR17333
LinkDB
All DBs
Position
1:821288..824779
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AA seq
1163 aa
AA seq
DB search
MFTVYHSNQVDVLKSLLVELIRISPLENPFEKEQILVQSPGMSQWLKMELAKEFGVAANI
DFPLPATFIWEMFTQVLPDVPKRSAFNKEAMTWKLMHLLPGLLDQEVFSPLAQYLKDDSD
HSKLYQLAEKIADIFDGYLVYRPEWIASWEAGLSVPELEDEHPWQPILWQALYDHTVSLG
QSPYHRANLYEHFIDTLASFNGNFDHLPKRLFVFGISSLPPRYMDALKAIGEHIDVHLMF
TNPCRYYWGEVRDRKYLARLAAKHRQHVVWQDDHSEVQGETEQLKGSLEDNVIDELHTDV
VGNSLLASMGKLGRDNMYLLSQLESHEIEAFVDVERDSLLHQLQADILNLEEHQDDQQIE
NSHHKQVVSLGDKSLSLHACHSPMREVEVLHDQLLAMFDADPTLKPRDIIVMVADINAYS
PAIQAVFGNAPGERFIPYSISDRTADQESPILAAFMQLVNLPNTRCLASELLELLETPAI
LKRFELSEDDFLQAKQWVEESGIRWGLDANTGREFELPETRQNTWQFGIQRMLLGYAMPE
SAGLFETEQGSLSPYNEVQGMGAELAGKLAHFIQQISTYRSKLSHVQTIDGWRETLVSLL
DDFFSVELEGEMALKSIRDTLSQLKEQLADAAFDDALSPSIISQYLQNKLSGTRVSQRFL
AGQVNFCTLMPMRSIPFRTVCLLGMNDGVYPRSMPPEGFDLMTGRTKPGDRSRRDDDRYL
FLEAMLSAQQTLYISYVGRSIQDNTERVPSVLVSELMEYCHQNYCLSGDEALPVDESGDN
LLNALVNTHAMVPFSPRAFQGTHASYAKEWIPAALTQSSQSQGYVRRDFNRALDDYLLGA
TFPLELDLVELQRFWRLPVQYFFNRRLKVIFEPPLPVMEDDEPFVLGGLESYQMRDELLE
TLLETTLTQPEKKAEVLKHFMSQQRAKGKLPVGAFGDIEFETNRVQAEDLVDKLAFLSGA
PQDDLEIDLTFDSLFERNEGEEKNVRLTGWLTQCYQSGLIRYRSGKIRAQDYLAAWIDHL
AMSASGHAKKTHLIGYDRKEGALHFIYPDIADVQYAKQLLTELVRLFFEGMTKPLPYFPK
TALACVEAGFSRGQWVDDEDKSLKKMADAFNDGFMSQGEGNNAYISRIWPAWNDELASEV
RLLTALVLQGARLAVQDADDVKA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactgtttatcactccaaccaagttgacgttcttaaatcactccttgtcgaactg
attcgaatcagtccgctggaaaacccgttcgaaaaagaacaaattctggttcaaagtccg
ggcatgtcccagtggctaaaaatggaattggccaaagagtttggtgttgccgcgaacatt
gattttccgctccccgctaccttcatttgggaaatgtttacgcaggtgttgccagacgtg
cccaagcgcagtgcgtttaacaaagaagcgatgacgtggaagctgatgcatctgctaccg
gggcttctcgaccaagaggtgttttcgccgttagcgcagtacctcaaagatgacagtgac
cactctaagctgtatcagctggctgagaaaattgccgatattttcgatggttacttggtg
tatcgtccggaatggatcgcaagttgggaagctgggctgagtgtgccagagctggaagat
gagcatccgtggcagccgatcctatggcaagcgttgtacgatcacactgtgtcattagga
cagtctccatatcaccgtgccaacctttatgagcactttatcgacacattagcgagtttt
aacggcaattttgaccatttacccaagcgtttgtttgtttttggtatttcttcgttgccg
cctcgctatatggatgcgctaaaagcaattggtgaacacatcgacgtgcacctgatgttc
accaacccgtgtcgttattactggggtgaagttcgagatcgcaaatatctggctcgtttg
gcggcgaaacatcgtcagcacgttgtgtggcaggacgatcactcggaagtgcaaggtgaa
acagagcaactgaaaggatcactggaagataacgtgatcgatgagctgcacaccgatgtg
gtcggaaacagtctgttggcatccatgggtaaactcgggcgcgacaatatgtatctgttg
tctcagctagaatctcatgaaattgaagcctttgttgatgttgagcgcgacagtctgctc
catcaattgcaagcggatattctcaatcttgaagaacatcaagatgaccaacagattgaa
aacagtcatcacaaacaagtggttagcttgggtgataaatcactgagcctacacgcttgt
cacagcccgatgcgtgaagtggaagtgctgcatgatcaactgttggcgatgttcgatgct
gacccaacgttaaaaccgcgcgatattatcgtgatggtcgcggacatcaacgcttacagc
cctgcgattcaggcggtctttggtaacgcgccgggtgagcgttttattccctattcgatt
tctgaccgaactgccgatcaagagagcccaattctggctgcatttatgcagttggtgaac
ttacccaatacgcgctgtttggcatcagaactactcgaacttctggaaactccagcgata
ttaaagcgttttgaactcagcgaagatgatttcttacaagccaaacaatgggttgaggaa
tcgggaattcgctgggggttggatgccaataccggacgcgaatttgaactgccggaaacc
cgtcaaaacacatggcaatttggtattcaacgcatgttgcttggctacgcgatgccagaa
tccgcaggtttgtttgaaaccgagcaaggcagtttgtctccgtacaacgaagtgcaaggc
atgggcgcagagcttgcgggcaagttggcacactttatccaacaaattagcacttatcga
agcaaactttctcatgttcagactattgatggttggcgagagactttggtttcactgctg
gatgacttcttctccgttgagttagaaggcgaaatggcgctcaaatccattcgcgatacg
ctcagccaactcaaagagcaattagctgatgccgcatttgatgatgcgttatcgccgtcg
atcatcagccaataccttcaaaacaaattatctggcacacgagtcagccagcgcttcctg
gctggtcaagtgaacttttgtactctgatgccgatgcgctctattccgtttagaaccgtt
tgtctactggggatgaatgacggcgtgtacccacgctccatgccgccggaaggctttgac
ttgatgaccggaagaaccaaaccgggcgatcgttcgcgccgagatgatgaccgttaccta
ttcctcgaagcgatgttgtctgcacagcaaacgctctacatcagttatgttggccgttca
atccaagacaacaccgagcgagtgccttcggttctggtttctgagctgatggaatactgt
caccaaaactattgtttaagtggtgatgaagcgttgcccgttgatgagtctggcgacaac
ttattaaatgcgttggtgaatacccacgccatggtgccgtttagcccaagagcgttccaa
ggtacgcacgccagctacgcgaaagagtggattccagcggcattgactcaaagcagtcaa
tcgcaaggctatgttcgtcgtgattttaatcgggcattagacgactatctgttaggagcg
acgttcccacttgagctcgacttagtcgagttgcaacgtttctggcgcttacctgtgcag
tattttttcaatcgtcgtttaaaagtaatctttgaaccgccactaccggtgatggaagac
gacgaaccctttgttttaggtggtttggaaagctatcaaatgcgtgatgagctgttagaa
accttgcttgaaacgacattgacgcagccagagaaaaaagcagaggtgcttaaacacttt
atgagtcaacagcgcgcgaaaggcaaactgccagtgggggcgtttggtgatatcgagttt
gaaaccaaccgagttcaggcggaagacctggtggacaaactggcgtttttatctggtgcc
cctcaagacgatttggaaatcgacctgacgtttgattccttgtttgagcgaaatgaaggc
gaagagaaaaacgttcgcctaacaggttggctaactcaatgctaccaatccggtttgatt
cgctatcgaagcggtaagattcgagcgcaagattaccttgcagcgtggatcgatcacctt
gccatgtcggcgtcgggtcatgctaagaaaacccatctgattggctacgatcgtaaagaa
ggcgcgctgcattttatctacccagacattgccgatgtgcagtatgccaagcagctactg
actgaattggttcgcttgttcttcgaaggcatgactaagcctttgccttatttcccgaaa
acggcgttggcttgtgttgaagcgggctttagccggggtcagtgggtcgatgacgaagac
aaatctttgaagaaaatggctgacgcattcaatgatggcttcatgagccagggcgaaggc
aataacgcgtacatctctcgaatttggcctgcttggaatgatgagttggcctcagaagtt
cgtttgctgacagcattagtactgcaaggtgcgcgcttagcggttcaagacgccgatgac
gtaaaagcgtaa
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integrated database retrieval system
