Vibrio sp. STUT-A16: VspSTUT16_07160
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Entry
VspSTUT16_07160 CDS
T10420
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis03018
RNA degradation
Brite
Enzymes [BR:
vis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VspSTUT16_07160
Messenger RNA biogenesis [BR:
vis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VspSTUT16_07160
DNA repair and recombination proteins [BR:
vis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VspSTUT16_07160
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Ortholog
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Gene cluster
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Other DBs
NCBI-ProteinID:
BDR17370
LinkDB
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Position
1:complement(859326..861290)
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AA seq
654 aa
AA seq
DB search
MYLSLPSKKGFPIMQSDSLHQTLQSVFGFDSLRQGQQPVIEAVMNGYSAAAIFPTGSGKS
LCYQLPATVLPNLTLVISPLLALMKDQLNFLQSKGIPAASIDSSQSREESQRVMAGVKNG
QIKILMISVERLKNERFREFIRQVPISLMVVDEAHCISEWGHNFRPDYLKLPQYQRELNI
PQSLLLTATATPAVIEDMKQKFDIASEHITVTGFYRPNLDISVIPCEEATKQEKLSEIIA
SSPKLPTIVYVTQQQTAEQVAKSLIRIGINAHAYHAGMKSDVREQIQQQFMDSQIDCIVA
TIAFGMGVDKSDIRRVIHFDLPKSIENYAQEIGRAGRDGQRSECILLGNTSGLTVLENFV
YGDTPELTSINYVVEQAKEHAPQWEVVPLRLSRESNIRQLPLKTLLVYLELHKLIEAKYS
YFAEYRFKFLHDQQFIVNQFQGERRQFVEAIFSCSQKAKVWCQVDLEALWMNYQSERNRV
VAALDYFHQNGWIELESKQLTDVYSVLPTTQSSDVLIQQLYELFQSKESKDIERIHTMLR
LFQSEHCLSSQLANYFADHNAPKQCGHCSVCRGQVASFPTPQGEDIEPPQVAVWVQEFIQ
LSPSAISNDAVARFLCGISTPLISQLKASKLAGYGAMANTSFEQVLAQVEAVRA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtacctaagtttaccatcaaagaaaggtttccctattatgcaaagtgactcgctgcat
caaacacttcaatccgtatttggttttgactcattacgccaaggtcaacaacctgttatt
gaagcggttatgaatggttactctgctgcggccatctttcctacaggttcgggtaagtct
ctctgttaccaattgccagcaaccgtattgcccaatcttacgttggtgatctcgccgttg
ttggcactaatgaaagatcagctgaactttttgcaaagtaaagggatcccggccgcttct
atcgatagcagtcaaagcagagaagagtcacaacgcgtcatggcaggggtaaaaaatgga
cagatcaaaatattgatgatttctgttgagcgcctaaagaacgagcgttttcgtgagttc
attcgccaagtgccgatctctttgatggtggttgatgaagcgcactgtatttccgaatgg
ggacataacttccgccctgattatctcaagctaccgcaatatcaacgtgaactgaacatt
ccacaatctttgcttctcactgcaacagcaacgcccgcagttattgaagacatgaaacaa
aagttcgatattgccagtgaacatattaccgttacaggcttctaccgccccaatctggat
atctcggtgatcccgtgcgaggaagcaacgaaacaagaaaagctaagtgagatcatcgcc
tcttcacctaagcttccgactatcgtatacgtgacacaacagcagacagcagagcaagta
gcaaagtcactaatccgtattggcattaatgctcacgcctaccacgccggcatgaaaagc
gacgttcgtgaacaaatccaacagcagttcatggatagccaaattgactgtattgttgca
acgattgcatttggtatgggggtcgataaatctgatatccgccgcgtcattcacttcgac
ttacccaaatcgatcgagaactacgcacaagagattggacgtgcaggcagggacgggcaa
cgttctgagtgcattctgctgggcaatacgtccggcttaacggtgttggaaaactttgtc
tatggtgacacacctgaactaacctcgattaactatgtagtcgagcaagcgaaagaacat
gctccacaatgggaggtagtgccactgcgtttatcgcgtgaaagtaatatccgccaattg
ccactcaaaaccttgttggtttatttggagctacataaactcattgaagcaaaatacagt
tactttgcggaatatcgctttaagtttttgcacgatcagcaatttattgtgaatcaattt
caaggcgagcgacgtcaattcgtggaggctattttctcctgctcgcaaaaagcaaaagtg
tggtgccaagttgacctagaagcgttatggatgaactatcaatcggaacgcaaccgagtt
gtcgcagccctcgactattttcaccagaatggttggatagagctagagagcaaacaactg
accgacgtgtactctgttttgccaaccacacagagttctgatgttttaatccaacaactg
tatgaactgttccaatccaaagaaagcaaagatatcgaaagaattcacaccatgctgcgc
ttgttccagtcagagcactgtttgagctcacaattggcgaactactttgctgatcacaat
gcaccaaagcaatgtggtcactgctccgtgtgtcgtggtcaagtcgcttcgttcccaaca
ccacaaggtgaggatattgagccacctcaagtagcagtgtgggtgcaggaatttattcag
ctctccccttcagctatcagcaatgatgctgtcgcccgcttcttgtgtggaattagcacc
cctttaattagccagctaaaagcttcaaaactggcgggttatggtgcgatggccaacaca
agctttgaacaagtattagctcaggtagaagcagtaagagcctag
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