Vibrio sp. STUT-A16: VspSTUT16_07700
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Entry
VspSTUT16_07700 CDS
T10420
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis03030
DNA replication
vis03430
Mismatch repair
vis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VspSTUT16_07700
03430 Mismatch repair
VspSTUT16_07700
03440 Homologous recombination
VspSTUT16_07700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vis03032
]
VspSTUT16_07700
03400 DNA repair and recombination proteins [BR:
vis03400
]
VspSTUT16_07700
Enzymes [BR:
vis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VspSTUT16_07700
DNA replication proteins [BR:
vis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VspSTUT16_07700
DNA repair and recombination proteins [BR:
vis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VspSTUT16_07700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BDR17424
LinkDB
All DBs
Position
1:916554..917276
Genome browser
AA seq
240 aa
AA seq
DB search
MNTSSNSEYNRIVVLDTETTGMNREGGPHYMGHRIIEIGAVEIINRKLTGRHFHVYLKPD
REIQPEAVEVHGITDEFLVDKPEYASVHQEFLEFIKGAELVAHNAPFDTGFMDYEFGMLD
PNIGKTDDYCKVTDTLAMAKKIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVY
LFMTGGQTSLEFNANKQEGGVETIRRIEGRKALKVLRASADELEAHQKRLELVNDCIWHQ
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagcagcaattctgaatataaccgcattgtcgttctcgataccgaaaccaca
ggtatgaaccgcgagggtggtcctcactacatgggacaccgcattattgaaatcggtgcc
gtggagatcatcaaccgtaagctgactggtcgtcacttccacgtttatttaaaacccgat
cgtgaaatccaaccagaagcggttgaagttcacggtattacggatgaattcttggttgat
aaaccggaatacgcgagcgtgcaccaagagtttcttgagtttattaaaggcgccgaactt
gttgcccacaatgcgcccttcgatacgggctttatggattacgagtttggcatgctcgat
cctaacatcggcaaaacggacgactactgcaaggtgaccgacacccttgctatggcgaag
aaaatcttcccaggtaagcgaaacaaccttgatatcttatgtgaacgttacggtattgat
aactcgcaccgtacactccacggagctttgctcgatgcggagattctagccgacgtttac
ctctttatgacgggtggtcaaacgagtctagagtttaacgcgaataaacaagagggtggg
gtagaaaccattcgccgtattgaaggaagaaaagcgctaaaggttttgcgcgcaagtgcc
gatgaactagaagctcaccaaaaaagattagagttggtgaacgactgtatttggcatcaa
tag
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