Vibrio sp. STUT-A16: VspSTUT16_08560
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Entry
VspSTUT16_08560 CDS
T10420
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00071
Fatty acid degradation
vis00280
Valine, leucine and isoleucine degradation
vis00310
Lysine degradation
vis00362
Benzoate degradation
vis00380
Tryptophan metabolism
vis00410
beta-Alanine metabolism
vis00640
Propanoate metabolism
vis00650
Butanoate metabolism
vis00907
Pinene, camphor and geraniol degradation
vis00930
Caprolactam degradation
vis01100
Metabolic pathways
vis01110
Biosynthesis of secondary metabolites
vis01120
Microbial metabolism in diverse environments
vis01200
Carbon metabolism
vis01212
Fatty acid metabolism
Module
vis_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VspSTUT16_08560 (fadJ)
00650 Butanoate metabolism
VspSTUT16_08560 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
VspSTUT16_08560 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VspSTUT16_08560 (fadJ)
00310 Lysine degradation
VspSTUT16_08560 (fadJ)
00380 Tryptophan metabolism
VspSTUT16_08560 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VspSTUT16_08560 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VspSTUT16_08560 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VspSTUT16_08560 (fadJ)
00930 Caprolactam degradation
VspSTUT16_08560 (fadJ)
Enzymes [BR:
vis01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VspSTUT16_08560 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VspSTUT16_08560 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VspSTUT16_08560 (fadJ)
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
BDR17510
LinkDB
All DBs
Position
1:999474..1001585
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AA seq
703 aa
AA seq
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MSEQKAFSLKVDEQNIAWLAIDVPNEKMNTLQAAFADEMKEIFAQLKDASGIKGMIIHSL
KPDNFVAGADVRMLEACTTASEAEALARQGQELFQQLSDLPYPVVAAIHGPCLGGGLELA
LACDYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAK
KLGVVDACVPDTILLDVAKQFIDKGKNKGTKKLSTKEKVMSGSGLGRKFVFEQAAKKTNQ
KTRGNYPATVAILDVIQHGLEKGFAQGQELEAKRFGELVMSSESKALRSIFFATTEMKKE
NGTDAKPAPVHKVGVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNALNYNYKLFEK
QRKRRILSKADLQAKMLQLSGGVDFTSFNHIDVVIEAVFEDLDLKQKMVADIEANAKPET
IFATNTSSLPIHKIAEKAERPENVVGLHYFSPVEKMPLVEVIPHETTSDETISTVVALAK
KQGKTPIVVKDKAGFYVNRILAPYMNEAAHILLANEPIEKIDTALLDFGFPVGPITLLDE
VGVDIGAKIMPILVNELGERFKGPDVFDILLNDGRKGRKSGKGFYTYKGKKKDVDKSIYK
LLKLDPESKLSDNDIALRCVLPMLNEAVRCLDDGIIRSPRDGDIGAIFGIGFPPFLGGPF
RYMDQFGIKELVEKMNEFASKYGDRYAPCDGLLTRAGEGTTFY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaaaaagcatttagtctaaaagttgatgagcagaatattgcttggttagcg
attgacgtacctaatgaaaaaatgaatacgctacaggcggcttttgctgatgaaatgaaa
gaaatctttgctcagctaaaagacgccagtggcatcaaagggatgatcattcattcccta
aaaccggacaactttgtcgcgggggccgatgttcgcatgctagaagcgtgcacgaccgca
agtgaagccgaagcattagcgaggcaaggtcaagagctattccagcagctatcggactta
ccatatcctgtggttgccgctattcacggtccatgtttgggcggtggtttagagcttgct
cttgcatgtgattatcgtgtttgtacggattcagataaaacgcgtttaggcctgccagaa
gtacaacttggtttattgccaggttctggtggtactcagcgtctgccgcgtttgattggc
ctgttaccgtcgttggacttgatcctgacgggtaaacaacttcgtgcgaagaaagctaaa
aaactgggcgttgtggacgcctgtgtccctgacaccattttgctcgacgtagcaaaacag
tttatcgacaaaggtaaaaacaagggtacgaaaaagctatcgacgaaagaaaaagtgatg
tcgggtagtgggttagggcgcaagtttgtgtttgaacaggcagcgaagaaaaccaatcag
aaaacccgtggtaactatcctgcaacggtcgcgattttagacgttattcagcatggttta
gagaaaggtttcgcccaaggacaagagcttgaagcgaaacgcttcggtgagcttgtgatg
agctctgaatcaaaagcgctccgttctatcttctttgcgacaacggaaatgaagaaagaa
aatggtacggatgcgaaacccgcgccagttcataaagttggcgtgcttggcggtggcttg
atgggcgcaggaatcagccatgtgtctgttgcaaaagcgaaggtgcctgtccgcatcaaa
gacgtcagcaacgatggcgttctaaacgcactcaactataactacaagttattcgagaaa
cagcgtaaacgtcgcattctatcaaaagccgatctgcaagcgaaaatgttgcaactgtct
ggcggtgtcgactttaccagctttaatcatattgatgtcgtaattgaagccgtttttgaa
gacttagatcttaagcaaaaaatggtggcggatattgaagctaatgctaagccggaaacc
atctttgcgactaatacttcttcgttaccaatccacaaaattgcagaaaaagcggagcgt
ccagaaaacgtagttggtttgcattacttcagcccggtagaaaaaatgccgttggtggaa
gtgattccgcatgaaacgacgtcagatgaaaccatttcaacagtcgttgcacttgctaaa
aagcaaggtaaaaccccgatcgtagtgaaagacaaagcgggcttttacgtgaaccgcatt
cttgcgccatacatgaacgaagcggcgcatattctgctggctaacgaaccaatcgaaaag
attgatacggcgttgcttgattttggtttccctgtcggcccgattaccttactggatgaa
gtcggtgtcgacattggcgcgaagatcatgccgattctggtcaacgagttaggcgagcga
ttcaaaggacctgacgtgttcgatatcttattgaatgacggtcgcaaaggacgtaagagc
gggaaaggtttctacacttacaaaggtaagaagaaagatgtcgataaatccatctacaag
ctgcttaagctcgatcctgaatctaagttgagtgataacgatattgcgttgcgctgtgta
ctaccaatgctgaatgaagcggtacgttgtttggatgacggcatcattcgctcgccacgt
gatggtgatattggtgcaatatttggcattggtttccctccattcttgggcggtccattc
cgttatatggatcagtttggcattaaagaactggttgagaaaatgaatgagtttgcatcg
aagtacggcgatcgttacgcaccgtgtgatggtttgcttactcgagctggagaaggaacc
acattctattaa
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