Vibrio sp. STUT-A16: VspSTUT16_08670
Help
Entry
VspSTUT16_08670 CDS
T10420
Symbol
mnmC
Name
(GenBank) tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vis03016
]
VspSTUT16_08670 (mnmC)
Enzymes [BR:
vis01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
VspSTUT16_08670 (mnmC)
Transfer RNA biogenesis [BR:
vis03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VspSTUT16_08670 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_30
DAO
Pyr_redox_2
NAD_binding_8
Mqo
Pyr_redox_3
F420_oxidored
FAD_binding_2
Nmad5
NAD_Gly3P_dh_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BDR17521
LinkDB
All DBs
Position
1:complement(1011187..1013205)
Genome browser
AA seq
672 aa
AA seq
DB search
MTSIKNAELGWNEAGTPVSDQFDDVYFSNVNGLEETRYVFLKQNHLPERWQEFDQRRFVI
GETGFGTGLNFLAVCQWFSEFRRQHPDAALKELHFISFEKYPLSQADLKKAHEAWPELAE
YAEKLQKHYPSAVPECHRIVLEDGAITLDLWFGDIKDCMPQVPYNEQGLIDAWFLDGFAP
SKNPEMWNQNLFNNMAKLAKQDCTVATFTAAGFVRRGLNEAGFAMKKVKGFGTKREMIAG
SMEQHEKQSNHLPWFNRTASSNLDSIAIIGGGIASAALAKTLVRRGQNVTLYCKDTQPAE
GASGNRQGAVYPLLNGPHTGVSRVFAPAFLFARQFIEQAAKSVTFDHDWCGVTQLMWDEK
SADKLEKMLAGNFPSELIQKLSAEETANTIGLPIDISSVHYPMGGWLCPAELTRGLIKQL
EQTSLLSTKFEHHVEALNWDEDHQLWTLTVNGQTFEHSTVVVANGHEFQTLSQTASLPMG
QVKGQVSHAPATETLSQLKTVLCYDGYMTPVNPNNQHLCIGASYDRSHLDYEFDENAQKD
NAEKLVKCVSNQEWPKEVDISGNRSRQGIRCVSRDHLPFVGNVGDFETIKTQYANLQNQK
AEEVETVHQFTNLFCFLGLGSRGLSSAPLLAEVLASQICGDPLPLPVDVLTELHPSRMWV
RKLRKGKAITEL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaataaaaaacgcagaacttggttggaacgaagctggtactccggtttcagac
caatttgatgatgtttacttctctaacgtaaacggtcttgaagagacacgctacgttttc
ttaaaacaaaatcatctcccagaaagatggcaggaatttgaccaaagacgttttgtcatt
ggtgaaacaggatttggcacgggattaaacttcttagcagtatgccagtggtttagtgag
tttcgtcgtcagcatccagacgcagcattgaaagagctgcattttattagctttgaaaaa
tacccgctaagccaagcggatttaaagaaggcgcatgaagcttggcctgagctagctgag
tacgcggaaaagttacaaaaacactacccttccgccgtacctgagtgtcaccgcattgtg
cttgaagatggcgcaattacactcgacctttggtttggcgacatcaaagactgcatgccg
caagtcccatacaacgaacaaggtttgattgacgcttggtttttagatggattcgcgcca
agtaaaaacccagagatgtggaaccaaaatctgttcaacaacatggctaagttagccaag
caagactgtacagttgccacttttaccgcagcgggctttgtgcgtcgaggattgaacgaa
gcaggctttgcaatgaaaaaagtcaaaggctttggcaccaagcgtgaaatgatcgcaggt
tcgatggaacaacacgaaaagcagtcgaaccatcttccgtggttcaatcgcacggcgtcc
agcaaccttgattcgattgccataatcggaggcggtattgccagcgcggcgttagcgaaa
acgttggttcgtcgtggccaaaacgtcacgctttactgtaaagacactcaaccagccgaa
ggagcgtcgggtaatcgtcaaggggccgtgtatcccttgttgaacggtcctcatactggt
gtttcgcgtgtgtttgcgcctgcatttttgtttgcaagacaatttattgaacaagctgcg
aagtcggttacattcgatcacgattggtgtggtgtaactcagctaatgtgggatgaaaaa
tctgctgataagctggaaaagatgcttgcgggtaattttccttctgaattgattcaaaaa
ctgtccgccgaggaaactgcgaatactatcggattacctatcgatatatcgtctgtgcac
taccctatgggagggtggttgtgccctgccgagctaacgcgtgggttaatcaaacaatta
gaacagacatcgttactctcaacgaagtttgaacatcacgttgaagcattaaattgggat
gaagaccatcagctttggacactaacggtcaatggtcaaacatttgagcactcaaccgtt
gtggttgcgaatggccatgagttccaaacattgagccaaaccgcttccctgccgatggga
caggtgaaagggcaagtcagtcatgctccggcaaccgaaacgctgagtcaattgaaaacg
gtattgtgttacgacggctacatgacgcctgttaacccaaacaatcagcacctgtgcata
ggcgcaagctacgatcgcagtcacctagactacgaatttgatgaaaacgctcagaaggat
aacgcagaaaaactagttaagtgcgtatcgaaccaagaatggccaaaagaggtagatatc
agtggcaatcgatctcgccaaggtattcgctgcgtgagccgagatcacttaccatttgtc
ggaaatgtgggtgactttgagacgataaaaacgcaatacgccaacttacaaaatcaaaaa
gcagaagaggtagaaaccgttcatcagttcactaacctattctgcttcttaggtttagga
tctcgtgggctgagctctgcaccattgttagctgaagtgttggcctcgcaaatctgtggg
gacccgctgccattacctgttgatgtattgaccgaacttcatccaagtcgaatgtgggtt
cgtaaactaagaaaaggcaaagccattactgagctgtaa
DBGET
integrated database retrieval system
