Vibrio sp. STUT-A16: VspSTUT16_08830
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Entry
VspSTUT16_08830 CDS
T10420
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis03030
DNA replication
vis03430
Mismatch repair
vis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VspSTUT16_08830
03430 Mismatch repair
VspSTUT16_08830
03440 Homologous recombination
VspSTUT16_08830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vis03032
]
VspSTUT16_08830
03400 DNA repair and recombination proteins [BR:
vis03400
]
VspSTUT16_08830
Enzymes [BR:
vis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VspSTUT16_08830
DNA replication proteins [BR:
vis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VspSTUT16_08830
DNA repair and recombination proteins [BR:
vis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VspSTUT16_08830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_14
ResIII
AAA_2
UPF0181
AAA_18
AAA_assoc_2
PIF1
Motif
Other DBs
NCBI-ProteinID:
BDR17537
LinkDB
All DBs
Position
1:1031512..1033617
Genome browser
AA seq
701 aa
AA seq
DB search
MSYLALARKWRPNQFDQVVGQKHVLTALENALAQNRLHHAYLFSGTRGVGKTSIGRLFAK
GLNCETGITATPCGKCDTCREIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV
DDIHQQLDYILGQEQVSAEPKALGMISHAADGSMRDALSLTDQAIALGNGAVQTDIVSHM
LGTIDTDQAIHLLESISSKQPQQAMDKIQQLAANGVEWDGLLQQVATQLHRIAMYQALPA
SLDRAQPDAEKIELLSKALSPQDVQLYYQIALKGREDLTLSPNGRVGLEMIVLRMMAFRP
SNNSGANIVSSNCEPASAPVQSASQPKTAPAQTVAAPRTQQPSPAQSTPQVAPQPSSNSQ
PEYHASGYETVPPQYDMAPPMSENPAPQHETPPQQVQESVSTSARGGLSGLRHQLRSQRQ
GLQQNTPQNGGSKKSKAASAQPESVIDRVAQLHGNSAQVSPNSAPKSTEPQVEEAYRWRP
SKPVETKVNTKLTPTQLKQALEHEKTPEMAQKLIDESLEHNEWAKLISLMEIPKLVEQLA
LNSHYSKEGTTVSLLLRSSQAHLNTDRAQAELLKALNTVLGEECHMSIEIGESGETPLEL
RDRLYQEKLQQALNSLENDPNVQFIERRFAAELDKDSVRPI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttagctttagcgcgaaaatggcgtcctaatcagtttgaccaagttgtcgga
caaaaacatgtcctgacggcgttggaaaacgcactggcgcaaaaccgtttacaccatgct
tatctgttcagcgggactcgtggtgtgggtaaaacgagtatcggtaggttgtttgccaaa
ggcttgaactgcgaaaccggtattaccgcgacaccttgtggtaagtgcgatacttgtcgt
gaaattgatgaaggtcgctttgtcgatcttcttgaaatcgacgcggcatcacgtactaaa
gttgaagacactcgcgaactgttagacaacgttcaatacaaacctgctcgtggacggttt
aaagtgtacctcatcgatgaggtacacatgctatcgcgtcactctttcaatgcgttgttg
aaaaccctggaagagccgccagagtatgtgaagttcttactcgcgacaaccgatccacaa
aagctgcctgttactatattgtcgcgttgtctacagttccatctcaaaccgatcagcgtt
gatgatattcatcagcaacttgactacattttgggtcaagagcaagtatcggcagaacca
aaagcactgggtatgatttcacatgctgcagatggcagtatgcgtgatgctctcagcttg
accgatcaagcaattgctttaggtaacggtgcggtacaaactgatattgtcagccacatg
ttggggacgattgataccgaccaagcgattcacttgctggagtcaatcagcagcaagcaa
cctcaacaagccatggataaaatccagcaattagcagcaaatggtgttgagtgggatggt
ttgttgcagcaagtcgcaacacagcttcatcgaattgcgatgtatcaagcgctgccagcg
tcgctagaccgagcgcagccagatgcagaaaaaatcgagttgttgagtaaagcactaagt
ccgcaagacgttcagctttactaccaaattgcattgaaaggtcgtgaagatttgactctc
tcgccaaacgggcgagtcggtctggaaatgattgtgctgcgtatgatggcgttccgccca
tcaaataacagtggggcaaatattgtttctagtaactgcgaaccagcttcagccccagtt
caaagtgccagtcaaccaaagactgcaccagctcagacagtagctgctcctcgaactcag
cagccgagtccagcgcaaagcacaccacaagtggcgcctcaaccttcatccaattcgcaa
cctgagtatcacgcgagtggatatgagacggttccgccacagtatgatatggcgccgccg
atgagcgaaaacccagcgccgcagcatgaaacgccacctcaacaagtgcaagagagcgtt
tcaacatcggcgcgcggtggtctaagcggtttacgtcaccaattacgctctcagcgtcaa
ggcctacaacagaacactcctcaaaatggtggctcaaaaaagtctaaagcggcatctgca
caaccagaatcggttatcgaccgagtagcgcaattgcatggcaattccgcgcaggtgtcg
ccaaactcagctccgaagtcgacggagccacaagttgaggaagcgtatcgctggcgtcca
agcaagcctgttgagacaaaagtgaatacaaaactgacacctacgcagctcaagcaggca
cttgagcatgagaaaacgcctgaaatggcacaaaagctcatcgatgaatcgttagaacat
aatgaatgggcgaagctaatcagcttaatggagatccctaagctggtagagcaacttgcg
ctaaactctcattatagtaaggaaggaacaaccgtttcgttactattgagaagcagccaa
gctcatttgaatactgatagagctcaagccgaattgcttaaagcacttaataccgtgtta
ggtgaagagtgccacatgagcatcgaaataggggagagtggagaaacaccacttgaactt
agagataggctctatcaagagaaattacagcaagcgctgaacagtttagaaaacgatcca
aatgttcaatttattgaacgtcgttttgctgcagagcttgataaagatagtgtgcgccct
atctaa
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