Vibrio sp. STUT-A16: VspSTUT16_08940
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Entry
VspSTUT16_08940 CDS
T10420
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K03442
small conductance mechanosensitive channel
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vis02000
]
VspSTUT16_08940
Transporters [BR:
vis02000
]
Other transporters
Pores ion channels [TC:
1
]
VspSTUT16_08940
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Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
GNAT_acetyltran
MS_channel_1st_1
DUF4083
Motif
Other DBs
NCBI-ProteinID:
BDR17548
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Position
1:1041016..1042695
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AA seq
559 aa
AA seq
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MTFHFPQKIRLTSWVALFALILGMMAPMVINAKDIQDTPEPSAAETSIDYLNREIVDLSQ
GLSQASGDERDALQLQLFQKNEELRSQLASAIERETIPRDKLISLVKKQEKYSEDATNYL
SEKIKKVVEDLNKAKDEEKLALVNDYRELQHYLDVSFDSSWQNLAWLKELGAQNERAEAE
LKDKVDKRMRLLSASIEYLSQQSEIIGSQLSSSPESEKASLQLSQLITKQRLNIATESLR
NLISIGDKVGLETSEYKRQIFEVTGNITHDLLNTKVVWSILSHWSNSALDWFAENAPQHI
FQLFVFALILLIARGLAKLTRKVVSKAVSSKNLKLSHLMQDFFISMSGKFVWVIGIMVGL
SQLGLNLAPILTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVYAGGVDGKVS
HMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYADDLLKAESVLS
DIITSHPAVLRTPEPMIKVHTLNTSSVDFIVRPWVKTDDYWDVYWDVTKEVKLRFDREGI
SIPFPQQDVHLHMVEKQDA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcatttcccccagaaaatacgcctgacatcttgggtggcattattcgcgctc
atcctcggtatgatggccccgatggtcatcaatgcgaaagatattcaggatacgccagag
ccctctgctgccgaaacttctattgattacttgaatcgagaaattgtggatttatcccaa
ggtctctcgcaagcgagtggtgatgagcgcgacgcgcttcaactgcagctgttccaaaaa
aatgaagagttaagaagtcagttagcatcagcgattgaacgtgaaactatccctcgtgac
aaattgatctccttggttaaaaagcaggaaaaatactctgaggacgccacaaactatctg
tcggaaaaaataaagaaagtcgttgaagatttaaataaagccaaggatgaagagaaactt
gctcttgttaatgattaccgagagttacagcattacctcgatgtcagcttcgattcaagt
tggcaaaaccttgcttggctgaaagagttaggggctcaaaatgagcgcgcagaagcggaa
ctaaaggataaagttgataaacgcatgcgcttgctgtctgcctcaattgagtacttgagt
cagcaaagtgagatcatcggctctcaactttcgtcaagccctgaatcggaaaaagcgtca
ctgcagctaagtcagcttattactaagcaaagactgaatattgcgacggaaagcctacgc
aatttaatttcgattggcgacaaagtcggtttagaaacgtccgaatataaacgccaaatt
ttcgaagtgacagggaatatcacccacgatttactgaatactaaagtagtgtggtcaata
ctgagccattggtccaactcggcactagactggtttgccgaaaatgcgccgcagcacatt
ttccagctgtttgtatttgcgctgattttattgatcgctcgtgggctcgcgaagttaacg
cgcaaagtggtcagcaaagcggtttcatcgaaaaacttaaaactctcacacttgatgcag
gacttctttatctcaatgtccggcaaattcgtgtgggtgattggtatcatggtgggccta
tctcagctcggattgaacctagcaccgatcctaaccggttttggtattgctggtgtgatt
atcggcttcgccttacaagacaccttgtccaacttcgcggcgggtatgatgttgcttatt
taccgcccatttgatgttggtgactttgtgtatgctggtggcgtggatggtaaggtaagc
catatgagtttggtgaacaccacaatccgtacgtttgataaccaaattattattgtacct
aacagtaaaatttggggagatgtcattaagaacgtcacacacgagcgcattcgccgtgtg
gatatggtgtttggcattggttatgcggatgacttgctgaaagccgagtcagtgctgtct
gatatcattacttctcaccctgcagtacttcgtacaccagagccgatgatcaaagtccat
acgttaaacacatcatctgtagactttattgttcgtccttgggtaaaaactgatgattat
tgggacgtgtattgggatgtgacaaaagaagtgaaactgcgctttgaccgagaaggcatt
tcgattcctttcccacaacaagatgtgcatttgcacatggtagagaagcaagacgcgtaa
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