Vibrio sp. STUT-A16: VspSTUT16_10640
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Entry
VspSTUT16_10640 CDS
T10420
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vis03032
]
VspSTUT16_10640 (ihfB)
03036 Chromosome and associated proteins [BR:
vis03036
]
VspSTUT16_10640 (ihfB)
03400 DNA repair and recombination proteins [BR:
vis03400
]
VspSTUT16_10640 (ihfB)
DNA replication proteins [BR:
vis03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VspSTUT16_10640 (ihfB)
Chromosome and associated proteins [BR:
vis03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
VspSTUT16_10640 (ihfB)
DNA repair and recombination proteins [BR:
vis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
VspSTUT16_10640 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HAAS
DUF4777
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
BDR17718
LinkDB
All DBs
Position
1:1218590..1218871
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AA seq
93 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEVEDAVKDILEHMASTLESGDRIEIRGFGSFSLHYREPRV
GRNPKTGDKVELEGKYVPHFKPGKELRERVNIG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtctgaactgattgaaagactctgcgctgagcaaacacacttatcagcgaaa
gaggtagaggatgctgtaaaagatattttagagcacatggcctctacgctagagagcggt
gaccgtatcgagatccgtggctttggtagtttttctcttcattaccgcgagcctcgcgta
ggtcgtaaccctaaaacgggcgataaagtggaattggaaggtaaatacgttccacatttc
aaacctggtaaagagcttcgtgagcgtgtaaatattggctaa
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