Vibrio sp. STUT-A16: VspSTUT16_18240
Help
Entry
VspSTUT16_18240 CDS
T10420
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
vis Vibrio sp. STUT-A16
Pathway
vis02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VspSTUT16_18240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vis02000
]
VspSTUT16_18240
Transporters [BR:
vis02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
VspSTUT16_18240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Beta-prop_EIPR1
Motif
Other DBs
NCBI-ProteinID:
BDR18478
LinkDB
All DBs
Position
1:complement(2065508..2066581)
Genome browser
AA seq
357 aa
AA seq
DB search
MSRMTKAPLALLISGMLLGTSAYAEDKLTVVSWGGAFTKSQVEAYHKPFIKKTGVEIVSE
DFSGGLAEIKAQVEANNVRWDLVSLDKPDIVRGCAEGLLEPVNPSILPPGADGTPAQEDF
IDGAIHECAINTIVVSTVLAVNEDAFKGKALPSKLTDLFDLKTFPGRRALQKQPQGNLEW
ALLADGVKPEEVYSLLETEAGRERAFAKLDTIKSEVLWWTTGAQPPQMLADKEVVIASAF
NGRIHNARKDEGQPFRIIWDRQMGYMNGWAIPKGSDNTKLALDFIAFSSGTKPLADQAKY
VAYGPTRKSSSAEVSPDILANLPTAPQNFQTAFLINDEWWSDYADELNEEFNTWLLN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaatgaccaaagcaccattggcgctgttgatttcaggaatgctgttggggacc
tctgcttatgctgaagacaaattgacggtcgtatcttggggtggtgcattcaccaagagc
caagtggaggcatatcataagcctttcattaaaaaaacaggtgttgagatcgtatccgag
gatttcagtggcggattagccgaaattaaagcgcaggtggaagcgaacaacgtgcgctgg
gatttggtttctctcgacaagccggacattgttcgtggttgcgccgaagggttactagaa
ccagtgaacccaagtattttgcctccgggcgcagatggaacaccagcacaagaggatttc
attgatggtgcgattcacgaatgcgcaatcaataccatcgtagtgtccactgtattagcg
gtgaacgaagacgcgtttaaaggtaaggctttgcctagcaagttgaccgatctctttgac
ctaaaaacttttccaggtcgacgtgcattgcaaaaacaacctcagggcaatcttgagtgg
gcactattggctgatggtgtaaagccagaagaggtctacagcctgctcgaaaccgaagcg
gggcgtgagcgtgcttttgctaagttggatacgatcaaatcagaagtgctgtggtggaca
acaggtgcccagccacctcaaatgcttgctgacaaagaagtggtgatcgcctcggcgttt
aacggccgaattcacaatgcccgtaaagatgaaggtcaaccatttcggattatatgggac
cgtcaaatgggttacatgaatggatgggcaatacctaaagggagtgataacacaaagctt
gcattggacttcatcgctttttcttcaggaacaaaaccattagctgatcaagctaagtac
gttgcctacgggcctacgcgtaaatcgtcttcggcggaggtgagcccagacattttagcg
aaccttcctaccgcacctcaaaacttccaaaccgccttcctgattaacgatgaatggtgg
tcagactacgcggatgaactaaatgaagagttcaatacctggctgcttaactag
DBGET
integrated database retrieval system
