Vibrio sp. STUT-A16: VspSTUT16_19110
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Entry
VspSTUT16_19110 CDS
T10420
Name
(GenBank) transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vis03000
]
VspSTUT16_19110
Transcription factors [BR:
vis03000
]
Prokaryotic type
Helix-turn-helix
Other families
VspSTUT16_19110
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_29
MarR
Penicillinase_R
HTH_24
DUF3640
Motif
Other DBs
NCBI-ProteinID:
BDR18565
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Position
1:2166783..2167637
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AA seq
284 aa
AA seq
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MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDPMQVNR
AVDLLTQAKRISFFGLGASSSVARDAQNKFIRFNIPITCFEDIVMQRMSCINCSDNDVVV
LISHTGRTKSQVEIANLARENGATVIAITAKDSPLEKASSLAITLDIPEDTDVYMPMASR
VVQMTVIDVLATGFTLRRGTGFRENLKRVKDALKDSRYDKLSQY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattagaaaaaattcaaaaaaacctggagaatttcagtaagtcagagcgcaaa
gttgcggaagtaattatggcgtctccacaaactgcaattcattcaagcattgcaacgttg
gctaaaatggctgatgttagtgagcccactgtaaaccgcttctgtcgtcgtctggacacc
aagggctttccagattttaagcttcacttggcacagagcctagccaacggtaccccttac
gttaaccgtaacgtggaagaagacgatggcccagacgcgtacacccataagatttttgaa
tcgaccatggcgtgtttagatgtcgcgaaaaacagcctagatccaatgcaagtgaaccgt
gcggtcgatttgctaacgcaagcgaagcgcatttcattctttggccttggtgcttcatct
tctgtagcccgagacgcacaaaacaagtttattcgctttaacattccaattacttgtttt
gaagacattgtcatgcagcgcatgagttgtattaactgcagtgataatgatgttgtggtt
cttatttctcacacaggtcgaacgaagagtcaggtcgaaatagcaaaccttgctcgtgaa
aacggcgcgacggtcattgcgattacagcaaaggactcaccgctagaaaaggcaagttca
ctcgctattacgcttgatattcctgaagataccgacgtctatatgccaatggcgagtcga
gttgtacagatgacggtgattgatgtacttgcaactggcttcacacttcgccgtggtaca
ggtttccgagagaacctaaaacgcgtaaaagatgcgttgaaagacagtcgctatgacaag
ctaagtcagtactaa
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