Vibrio sp. STUT-A16: VspSTUT16_20660
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Entry
VspSTUT16_20660 CDS
T10420
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VspSTUT16_20660 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vis01007
]
VspSTUT16_20660 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vis03016
]
VspSTUT16_20660 (aspS)
03029 Mitochondrial biogenesis [BR:
vis03029
]
VspSTUT16_20660 (aspS)
Enzymes [BR:
vis01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
VspSTUT16_20660 (aspS)
Amino acid related enzymes [BR:
vis01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VspSTUT16_20660 (aspS)
Transfer RNA biogenesis [BR:
vis03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VspSTUT16_20660 (aspS)
Prokaryotic type
Other AARSs
VspSTUT16_20660 (aspS)
Mitochondrial biogenesis [BR:
vis03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
VspSTUT16_20660 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
DUF4388
Motif
Other DBs
NCBI-ProteinID:
BDR18720
LinkDB
All DBs
Position
1:complement(2338243..2340021)
Genome browser
AA seq
592 aa
AA seq
DB search
MRTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVA
NTLRNEFCIKLTGEVRVRPESQANKDMATGEVEILATGLEIINRSDVLPLDFNQKNSEEQ
RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPS
RVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMT
AEQVREVTENMVRDMWQELLNVDLGQFPVMPFSEAIRRFGSDKPDLRNPLELVDVADLVK
DVEFKVFSGPANDEKGRVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVNDRAAG
MEGIQSPVAKFLNEDVINAILDRTQAESGDIILFGADKAGIVAEAMGALRLKLGKDLELT
DESAWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAYDMVLNG
YEVGGGSVRIHNADMQEAVFDILGITPEEQQLKFGFLLDALKFGTPPHAGLAFGLDRLVM
LLCGTENIRDVIAFPKTTAAACLLTDAPSIANPAALEELAIAVTAAKEKDAE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccattactgtggtcacctgaacaagtcccttgcaggacaaactgtagaactt
tgcggctgggttaaccgtcgtcgtgatttaggcggtcttatttttattgatatgcgagat
cgcgaaggtatcgttcaggtagttgttgatccagatatggcggatgcgtatgaagtggct
aacacacttcgtaatgaattctgtatcaaactaacgggtgaagtacgcgttcgtccagaa
agccaagcaaacaaagacatggcaacaggtgaagttgagatccttgcgacaggtcttgaa
atcatcaaccgcagtgacgttttgcctctagatttcaaccaaaagaactctgaagagcaa
cgtctgaagtaccgttacttagatctacgtcgtcctgaaatgagcgatcgcatcaagcta
cgtgctaaagcgtctagctttgttcgtcgtttcctagacgacaacggcttcctagatatc
gaaacaccagtactaacgaaagcgacaccagaaggcgcgcgtgactacctagtacctagc
cgtgttcacaaaggcagcttctacgcgcttcctcagtctccacagctattcaaacagctt
ctaatgatgtctggttttgaccgttactaccaaatcgttaagtgtttccgtgatgaagac
ttacgcgctgaccgtcaaccagaattcactcaaatcgatatcgaaacgtcattcatgacg
gctgagcaagtacgtgaagtgacggaaaacatggttcgcgatatgtggcaagagctacta
aacgtagacctaggtcagttcccagtaatgccattcagcgaagcgattcgccgtttcggt
tctgacaagccagacctacgtaacccgttagagttagttgatgtcgctgacctagtgaaa
gacgttgagttcaaagtattctctggcccagcaaacgatgagaaaggtcgcgttgccgtt
attcgcgttccaggtggtgcatctttgactcgtaagcaaattgatggctacggtgaattc
gttggtatctacggtgcgaaaggtctagcttggatgaaggttaacgatcgtgcagcaggc
atggaaggtatccaatctccagtagctaagttcctaaacgaagatgtgatcaacgctatc
ctagatcgcactcaagcggaatctggtgacatcatcctatttggcgctgataaagcgggc
atcgttgcagaagcaatgggtgcgctacgtttgaaactaggtaaagacctagagctaact
gacgaatctgcatgggctccactatgggttgttgacttcccaatgttcgaagaagatgac
gaaggcaacctacacgcgatgcaccacccattcacgtcacctctaggtgtgactgcggaa
gagctaaaagcgaacccagctgcggcaaactctaacgcttatgatatggttctaaatggc
tacgaagttggcggcggttctgttcgtatccacaacgcagatatgcaagaagccgtattt
gatattctaggcatcacacctgaagagcaacagcttaagtttggcttcctgcttgatgca
ctgaaattcggtacgcctccacacgctggtcttgcattcggtcttgaccgtctagtgatg
ctgctatgtggtaccgagaacatccgtgatgttattgcattcccgaaaacaacagcagcg
gcgtgtctactaacagacgcaccaagcattgctaacccagctgcgctagaagagctagca
atcgcagtgactgcagcgaaagaaaaagacgcagaataa
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