Vibrio sp. STUT-A16: VspSTUT16_20980
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Entry
VspSTUT16_20980 CDS
T10420
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00020
Citrate cycle (TCA cycle)
vis00480
Glutathione metabolism
vis00720
Other carbon fixation pathways
vis01100
Metabolic pathways
vis01110
Biosynthesis of secondary metabolites
vis01120
Microbial metabolism in diverse environments
vis01200
Carbon metabolism
vis01210
2-Oxocarboxylic acid metabolism
vis01230
Biosynthesis of amino acids
vis04146
Peroxisome
Module
vis_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vis_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VspSTUT16_20980
09102 Energy metabolism
00720 Other carbon fixation pathways
VspSTUT16_20980
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VspSTUT16_20980
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VspSTUT16_20980
Enzymes [BR:
vis01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
VspSTUT16_20980
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Gene cluster
GFIT
Motif
Pfam:
IDH
Ribosomal_L17
DUF5363
CUE
Motif
Other DBs
NCBI-ProteinID:
BDR18752
LinkDB
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Position
1:complement(2375943..2378168)
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AA seq
741 aa
AA seq
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MPTEKPTIIYTITDEAPALATYSLLPIIQSFTASSGINVDTRDISLAGRIIANFPEHLKE
EQRIGDALTELGELAQTPEANIIKLPNISASVPQLKAAIKELQAKGYDLPNYPEEPSTYE
EKAIKAAYDKIKGSAVNPVLREGNSDRRAPTSVKNYAKKNPHSMGAWSSESKSHVASMSD
NDFFGSEKSTTISGATEVKIEFVGNDGTVKELKSAFPLLDKEVIDTSVMKKKALVEFFEK
EIAEAKAQDVLLSLHMKATMMKVSDPVIFGHAVKVYYKDVFDKYGKLFEELGVDVNNGIG
DVYSKIESLPEAQKAEIEAAIQAVYQTQPELAMVDSDRGITNLHVPSDIIVDASMPAMLR
SSGQMWGPDGKQKDTKAMIPDRSYAGIYQAVIDFCKEHGAFDPTTMGSVPNVGLMAQKAE
EYGSHDKTFILDAAGTVRVVDTAGNVLLEQAVEEGDIFRMCQVKDAPIQDWVKLAVTRAR
ATGVPAVFWLDENRAHDAELIKKVNTYLPEHDTDGLEIKILSPVDACKYSLERMKAGLDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKENH
LRWDSLGEFLALAASLEHLSVVANNPKAQVLADTLDKATGEFLDTNKSPSRKVGELDNRG
SHFYLALYWAKALAEQTDDADLAAEFAPIAKALSEHEEKIVAELNNAQGVKGELGGYYLL
DDALVSKLMRPSETFNAIINK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagaaaaacctacaattatctacaccatcactgatgaagcgccggcgctagca
acttattcattactaccaatcattcaatcattcacagcatcgtctggcatcaatgtagat
actcgtgatatttcactagcaggtcgaattatcgctaacttcccagagcatctaaaagaa
gaacagcgcattggcgatgcgttgactgagcttggtgaactggctcaaactccagaagca
aatatcatcaagctgcctaacatttcagcttcagttcctcagcttaaagcggcgattaaa
gagcttcaggcgaaaggttacgatttaccaaactacccagaagaaccgagcacgtacgaa
gagaaagcgattaaagcggcttacgacaaaatcaaaggtagtgcggttaacccagtactt
cgtgaaggtaactcagaccgtcgtgctccaacttcggttaagaactacgcgaagaaaaat
ccacattcaatgggtgcgtggtcatcagagtctaagtctcatgttgcgagcatgtcagac
aatgacttctttggtagcgaaaagtccacgactatctctggtgcaacagaggtaaaaatc
gagtttgttggtaatgacggtacagttaaagagctcaagtctgcgttcccattactagat
aaagaagtcattgacacttcagtgatgaagaagaaggcgctggttgaatttttcgagaaa
gagattgctgaagcgaaagcacaagacgtgctgttgtctcttcatatgaaagcgacgatg
atgaaggtttctgacccagtcattttcggccatgcagtgaaagtttactacaaagacgtt
ttcgataaatacggtaagctgtttgaagaactgggcgttgatgtaaacaatggcattggt
gatgtctactcgaaaattgagtctctacctgaagcgcaaaaagcagaaattgaagcggcc
attcaagcggtttaccaaactcaaccagaacttgcgatggttgactctgatcgtggtatc
acaaacttacatgtaccaagcgacattattgtagacgcttctatgccagcaatgcttcgc
tcttctggtcaaatgtggggaccagatggtaaacaaaaagacaccaaagcgatgatacca
gatcgtagctacgcaggtatttaccaagcggtgattgatttctgtaaagagcacggcgca
tttgacccgaccactatgggtagcgtgcctaacgttggcttaatggctcaaaaggcagaa
gaatatggttctcacgacaagacgttcattctagatgcagcgggtaccgttcgcgttgtt
gatactgcgggtaacgtattgttagagcaagcggttgaagaaggcgatatcttccgtatg
tgtcaggtgaaggacgcaccaatccaagattgggttaaactagcagtgactcgcgcacgt
gcaacaggtgttccagccgtattctggctagacgaaaaccgtgcgcacgatgctgaactc
attaagaaagtaaatacctacttaccagagcacgatactgacggtctagagattaagatc
ctatctcctgttgatgcttgtaagtactcgctagagcgtatgaaagcgggtctggatact
atctctgtaacgggtaacgttcttcgtgactacctaacagacttgttcccaattctagag
ttaggcacgtcagctaagatgctatctatcgttccattgatgaatggcggtggtctattt
gaaactggtgctggtggttctgctcctaagcatgttcaacaagtagaaaaagagaatcac
cttcgttgggattctttaggtgagttcttagcactagctgcatccctagaacatctaagt
gtggtggcaaacaacccgaaagcacaagttttggcggatacgctagacaaagcgactggt
gagtttttagataccaacaagtctccatcacgtaaagtgggcgaattagataaccgcggt
agtcatttctacctcgcactttactgggcgaaagcacttgccgagcaaacagacgatgct
gatctcgctgctgagtttgcaccgattgcgaaagcgttgtcagagcatgaagaaaaaatc
gtcgctgagctaaacaacgcacagggtgtgaaaggagaattgggcggttactatctgcta
gatgatgcattggtttctaagttgatgcgcccaagcgaaacctttaacgcgatcattaac
aagtaa
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