Vibrio sp. STUT-A16: VspSTUT16_21220
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Entry
VspSTUT16_21220 CDS
T10420
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00541
Biosynthesis of various nucleotide sugars
vis01100
Metabolic pathways
vis01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VspSTUT16_21220 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vis01005
]
VspSTUT16_21220 (kdsB)
Enzymes [BR:
vis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
VspSTUT16_21220 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
vis01005
]
Lipid A
VspSTUT16_21220 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
BDR18776
LinkDB
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Position
1:complement(2407538..2408293)
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AA seq
251 aa
AA seq
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MSFTVVIPSRYASSRLPGKPLADIGGKPMVQWVYDQALQAGAEDVIVATDDERVADAVSS
FGGKVCMTSPNHESGTERLAEVVEKMAIPADHIIVNVQGDEPLIPPSIIRQVADNLSGCD
APMATLAVEIDSEEEVFNPNAVKVVANEQGYAMYFSRATIPWDRDNFAKQDKIIANPLMR
HIGIYAYRAGFINTYVNWAPSALEQIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDL
EAVRAIVAKQA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttacggttgtcattccttcgcgttacgcatcgagccgcttgcctggtaaaccg
ttagcggatattggcggtaagccaatggttcagtgggtttacgatcaagcgctacaagcg
ggtgcggaagatgttatcgtggcaactgatgacgagcgtgttgctgatgctgtctcgtcg
tttggtggtaaagtctgtatgacctctcctaaccacgaatcaggtactgaacgccttgct
gaagttgttgaaaaaatggctattcctgcagaccacattattgttaatgtgcaaggggac
gagcctttgattccaccgtctatcattcgtcaggttgctgataacttatcggggtgtgac
gctccgatggcgacattagccgtagaaatagactcagaagaagaagtgttcaatccgaat
gcagttaaagttgtggctaatgagcaaggctatgcgatgtactttagtcgagcaactatc
ccttgggatcgcgataactttgccaaacaagacaaaatcattgccaatccattaatgcgt
catattggtatttatgcttatcgagctggtttcattaatacgtatgtaaactgggctccg
agcgcattggagcagatcgagtgccttgagcaactacgagtgctttggtacggtgaaaaa
attcatgtagcggtagcgaaagaagcgccagcagccggcgttgatacgccagaagatcta
gaggcggtgcgcgctattgtggcgaagcaagcataa
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