Vibrio sp. STUT-A16: VspSTUT16_21250
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Entry
VspSTUT16_21250 CDS
T10420
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VspSTUT16_21250 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vis02000
]
VspSTUT16_21250 (msbA)
Enzymes [BR:
vis01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
VspSTUT16_21250 (msbA)
Transporters [BR:
vis02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VspSTUT16_21250 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
APS_kinase
AAA_22
RsgA_GTPase
AAA_25
Zeta_toxin
AAA_24
AAA_29
SLFN-g3_helicase
G-alpha
AAA_15
AAA_30
DEAD
nSTAND3
TniB
ATPase
MMR_HSR1
ABC_ATPase
ABC_membrane_2
EMC3_TMCO1
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
BDR18779
LinkDB
All DBs
Position
1:complement(2409466..2411214)
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AA seq
582 aa
AA seq
DB search
MSINTDETTWQTFKRLWQFIRLYKSGLVVAVIALVINAISDTYMISLLKPLLDEGFGNAE
SDFLRTLPLIIFAMMFVRGISGFVSTYCLSWVSGNVVMQVRRMVFNHFMHMPVSYFDKEK
TGNLLSRITYDSEQVSAATSQALVSIVREGASIIGLLVLMFYNSWQLSLVLFAVAPVVAW
GIGVVSKRFRKISKNMQTMMGNVTASAEQMLKGHKVVLSYGGQDIERKRFEKVSNQMRQQ
SMKLVTAQAAANPIIQMIASLAIVAVLYLASIDSIKEQLTPGTFTVVFSAMFGLMRPLKA
LTNVTSQFQRGMAASQTLFALIDLEPEKNEGKLTVERANGDVSVKNVSFTYTGAEKPALE
NVSFDIPRGKTVALVGRSGSGKSTIANLFNRFYDVDSGSITLDGHDIREYELKNLRQQFA
LVSQNVHLFNDTIANNIAYATDGKYERSDIEKAAKLAHAMEFISKMDDGLDTMIGENGAS
LSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKDKTVLVIAHRLS
TIEKADEILVVDDGAIIERGNHADLIAKNGAYAQLHRIQFGE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataaatactgatgaaacgacttggcagacgtttaagcgtctatggcaatttatt
cgcctttacaagtcaggtcttgtcgttgcagtcattgcattagttattaatgctatatca
gatacctatatgatttccctattaaaaccattactagatgaaggttttgggaacgctgaa
tctgattttctacgcacgcttccattgattatttttgccatgatgtttgtccgtggcata
agtggatttgtctccacatactgtttgagctgggtatccggcaatgtggttatgcaagtc
cgccgtatggtattcaatcactttatgcatatgcctgtgtcttacttcgataaggaaaag
acgggcaatttattgtcacgtattacctacgattcagagcaagtatctgcggcaaccagc
caagcgttagtgagcatcgttcgtgaaggtgcaagtatcattggcctgttagtcctgatg
ttttacaacagctggcagttgtcgttagtgctgtttgctgttgctcctgttgtcgcgtgg
ggtattggtgtcgtttctaaacgttttagaaaaatatccaaaaatatgcagacaatgatg
ggcaacgtgactgcgtcagcagagcagatgctgaaaggccataaagtcgtgttgagctac
ggcggccaggatatcgaacgtaaacgatttgagaaggtcagcaaccaaatgcgtcaacaa
agcatgaagttggtgacggctcaagcggcggctaaccctatcatccaaatgattgcgtca
cttgctattgttgccgttctttacttagcaagtattgactcgattaaagagcaactgact
ccaggtacatttaccgttgtcttctctgcgatgtttggtttgatgcgtccgcttaaagcg
cttactaacgttacctctcagttccaacgtggtatggctgcgagccaaacgctctttgcg
ttgattgaccttgagcctgagaaaaacgaaggtaagttgacagttgaacgcgcaaatggc
gatgtttcagttaaaaacgtaagctttacttatactggcgcagaaaagccagcattggaa
aatgtcagcttcgatattccaagagggaagaccgttgcgctggttggtcgttccggttcc
ggtaaaagtaccatcgcgaacttgttcaatcgtttctatgatgttgatagtggctccatc
acactagacggacatgatattcgtgaatacgagttaaagaacttgcgtcagcagtttgcg
ctagtatcacaaaatgttcatttatttaatgacacgattgcaaacaatattgcttacgca
acggatggaaaatacgagcgcagtgatatcgagaaagcggcaaaactcgcgcatgctatg
gaattcatcagcaaaatggatgatgggcttgataccatgattggtgaaaatggcgcgagt
ctatctggcggtcaacgtcaacgtgtcgctattgcacgtgctctattgcgtgatgcaccg
gtattgattcttgatgaggcgacctctgctttggatacggaatccgaacgcgctatccaa
gctgcattagatgagctgcagaaagacaaaacggtactcgtgattgcgcaccgcttatcc
acaatcgagaaagccgatgaaattcttgtggttgatgatggcgccatcattgagcgtggc
aaccacgccgatcttattgcaaaaaatggtgcgtatgcacaattgcaccgtattcagttt
ggtgaataa
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