Vibrio sp. STUT-A16: VspSTUT16_22180
Help
Entry
VspSTUT16_22180 CDS
T10420
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vis03032
]
VspSTUT16_22180
03036 Chromosome and associated proteins [BR:
vis03036
]
VspSTUT16_22180
03400 DNA repair and recombination proteins [BR:
vis03400
]
VspSTUT16_22180
DNA replication proteins [BR:
vis03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VspSTUT16_22180
Chromosome and associated proteins [BR:
vis03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VspSTUT16_22180
DNA repair and recombination proteins [BR:
vis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VspSTUT16_22180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ACP_syn_III_C
Arteri_nsp7a
GTP_EFTU_D2
DUF7342
HU-CCDC81_euk_1
VWA_2
Nup214_FG
Motif
Other DBs
NCBI-ProteinID:
BDR18872
LinkDB
All DBs
Position
1:complement(2516381..2516653)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLVEQIAENADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAKVPAFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaactcagttagtagaacaaatcgcagaaaatgcagacatttctaaagcgtca
gcgggtcgtgctctagatgcattcatcgaagcagtaagcggtactcttcagtctggtgat
caagttgctctagttggctttggtacatttagcgttcgtactcgtgctgcacgtactggt
cgtaacccaaaaactggtgaagaaatccaaatcgcagaagcaaaagtaccagcttttaaa
gctggtaaagcactgaaagacgcttgtaactaa
DBGET
integrated database retrieval system
