Vibrio sp. STUT-A16: VspSTUT16_23910
Help
Entry
VspSTUT16_23910 CDS
T10420
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vis03016
]
VspSTUT16_23910 (miaB)
Enzymes [BR:
vis01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
VspSTUT16_23910 (miaB)
Transfer RNA biogenesis [BR:
vis03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
VspSTUT16_23910 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BDR19045
LinkDB
All DBs
Position
1:2704370..2705794
Genome browser
AA seq
474 aa
AA seq
DB search
MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEEPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKPGVVIGVGGCVATQEGDHIRERAPYVDVIFGPQTLHRLPEMIKQSQS
DDAPVMDISFPEIEKFDRLPEPRAEGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLFEIAQLAEQGVREVNLLGQNVNAYRGPTHDGEICSFAELLRLVASIDGIDRIRFTTSH
PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI
QISSDFIVGFPGETDKDFQDTMKLIKDVDFDMSFSFIFSPRPGTPAADYPCDVSEQVKKE
RLYELQQTINAQAMRYSRLMLGTEQRVLVEGPSKKNLMELRARTENNRVVNFEGSADLIG
QFVDVKIVDVFANSLRGELVRTEKDMDLRSVISPTQMMAKTRREDELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacctggggctgccagatgaacgaatacgattcatca
aaaatggccgacctgcttaatgctgcaaacggctacgagctgacggaagagccagaggaa
gcagacgtacttctacttaacacctgttcgatccgtgaaaaagcgcaagagaaagttttc
caccagcttggccgctggaaaacactaaaagataaaaaacctggcgtagttatcggtgta
ggtggttgtgtagcaacgcaagaaggtgaccatattcgtgaacgtgcaccatacgtcgac
gttatttttggcccacaaactctgcaccgcctacctgagatgatcaaacaatctcagtcg
gatgacgcaccagttatggacatttcgttcccagagatcgaaaagttcgaccgcctacca
gagcctcgtgcggaaggcgcgacagcattcgtttctattatggaaggctgctcgaagtac
tgtacttactgtgtcgtaccgtacactcgtggtgaagaagtaagccgtccaatggatgac
gtgctgttcgaaatcgcacagcttgctgaacaaggcgtacgtgaagtaaacctactgggt
caaaacgtaaacgcgtaccgcggtccaacacacgacggtgaaatctgttcatttgcagaa
ctgcttcgtttggttgcgtctatcgatggtatcgaccgtattcgtttcacaacgagccac
ccgctagaattcactgacgacatcatcgcggtttacgaagatacgcctgagcttgtgagc
ttcctgcacttacctgtgcaaagtggtagtgaccgtatcctaactatgatgaaacgccct
cacaccgctatcgagtacaagtcgatcatccgtaaactgcgtaaagctcgtcctgatatt
caaatcagttcagactttattgttggtttccctggtgagacagacaaagacttccaagac
acaatgaagctaatcaaagatgtagactttgacatgagcttcagcttcatcttctctcca
cgtccaggtacgccagcagcggattacccttgtgatgtatcagaacaagtgaagaaagag
cgcctttacgaactacagcaaactatcaatgctcaagcgatgcgttactctcgcttaatg
cttggcacagaacaacgtgttctagttgaaggtccttcgaagaaaaacctaatggaactg
cgcgctcgtacagaaaacaaccgtgtagtaaactttgaaggtagtgcagacctaattggt
cagttcgttgatgtgaagatcgtagacgtatttgcgaactcactgcgtggtgagctagta
cgtactgaaaaagacatggatcttcgtagtgtgatttccccaacgcagatgatggcgaaa
acacgtcgcgaagatgagctgggtgtagctacttttacgccgtaa
DBGET
integrated database retrieval system
