Vibrio sp. STUT-A16: VspSTUT16_24020
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Entry
VspSTUT16_24020 CDS
T10420
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00550
Peptidoglycan biosynthesis
vis01100
Metabolic pathways
vis01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VspSTUT16_24020
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VspSTUT16_24020
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vis01011
]
VspSTUT16_24020
Enzymes [BR:
vis01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VspSTUT16_24020
Peptidoglycan biosynthesis and degradation proteins [BR:
vis01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VspSTUT16_24020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BDR19056
LinkDB
All DBs
Position
1:2716061..2717977
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AA seq
638 aa
AA seq
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MIRKRRSQIRDYQAEARLFASRAIVAFIGIVLLMGALVANMYNIQVNQFQDYQTRSNDNR
IKVVPIAPNRGLIYDRNGVLLAENRPVFNLELTPEKIKDIDATIQELQTILEITPDQIER
FHQERKRTRRFKSVPLLTQLNEKQVAVFSVNQYRFPGVEISATLKRYYPFSEVLTHVIGY
VSRINDRDMQRLIREEKDANYQATRDIGKLGIEKYYEDLLHGTAGYQEVEVNSRGRVIRT
LKYVPPVPGKDIVLNLDINLQLYVHQLLDGRRGSAVVIDPRDNGVLAMVSSPSYDPNSFV
HGISGKDYRALLNDKNRPLVNRTTLGIYPPASTIKPFMAVAALQEGVVTPNTTRNDPGYW
RIPNSNTRPFRDWLRWGHGRVDIIKSIEESVDTFYYQIAYDMGIDRISNWMMMFGFGDYT
GIDIYEESKANMPTRDWKMSRHKTPWYKGDTIPVGIGQGYWTATPMQIAKATSVLVNEGE
VIAPHLLKATIENGNDFEEQQTTEYVTYPPIKNVPKKYWDMAKEGMRRVNHGTRGTARRS
FYKMSYQTAGKSGTAQVFGLGENEEYNADEIAEHLRDHALFTGFAPFDDPKVVVTVVLEN
AGGGSSNGAPVVRKIFDRVVLGPEEIEPENNAKKEVKQ
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtaagcgccgcagtcaaatccgagattatcaagccgaagcgcgtctgtttgcc
agccgcgctattgtcgcttttatcggcattgttctcttgatgggagctctggtcgccaat
atgtacaacattcaggtgaaccagtttcaagactatcaaacccgctcgaacgataaccgc
atcaaagtagtgcctatcgcgcctaaccgaggtctaatttatgaccgaaatggcgtttta
ctggcagagaaccgtcccgtctttaacttagaactgaccccagaaaaaattaaagacatt
gatgcaaccatccaagaattacaaactattctggaaattacaccagaccagattgaacgt
ttccaccaagagcgtaaacggactcgtcgatttaagtcggtcccactgcttacccaactg
aacgaaaaacaagtagcggtattctccgtcaatcagtaccgctttcctggtgtagaaata
agtgcgaccttaaagcgctactaccctttcagcgaagtattaacccacgtgattggttac
gtttctcgaatcaatgatcgcgacatgcagcgcctgatccgagaagaaaaagacgcaaac
tatcaagccactcgcgacattggtaagctgggtatcgaaaaatactacgaagacctctta
cacggtacggccggatatcaagaagtcgaggtaaacagccgcggccgcgtgattcgtacg
ttaaagtacgttccacctgtacccggaaaagacatcgttttaaaccttgatatcaacttg
cagctgtacgtacaccaattattggatggccgccgaggcagtgctgtagtgatcgatcct
agagacaacggcgtgctggctatggtttcaagccctagctacgaccctaactcgttcgtg
cacggaatctcgggtaaagactatcgcgcccttttgaacgataaaaaccgtcctttggtc
aaccgtaccacacttggcatttatccacccgcgtctaccatcaagccatttatggcggta
gccgcgctgcaagaaggcgtcgtcacacctaacaccacacgaaatgatcctggttattgg
cgcataccaaactccaacacacgcccgttccgtgactggttgcgttgggggcacggacgc
gtcgatatcattaagtcgatcgaagagtctgttgatactttctactatcaaatcgcttat
gacatgggtattgaccgtatttcgaattggatgatgatgttcggttttggtgattacact
ggcattgatatctacgaagaaagtaaggcgaatatgccgactcgtgactggaaaatgtct
cgccataaaaccccatggtataaaggtgatacgatccctgtgggtatcggccaaggatat
tggacagcaacaccaatgcaaatcgccaaagcgacctccgtattagtaaatgagggagaa
gtgatcgcacctcacttgctcaaagcgacgatagagaacggcaacgacttcgaagaacaa
caaacaacagaatacgtgacttacccgccaatcaagaatgtaccgaaaaagtactgggat
atggcgaaagaaggcatgcgtcgtgtaaaccatggcacgcgcggaacagctcgccgctca
ttctacaaaatgagttatcaaacagcgggtaaatcaggtactgcgcaagtcttcggtctg
ggtgaaaatgaagagtacaacgcagatgagatcgccgagcacttacgtgaccatgcgtta
tttactggctttgcaccatttgatgatcctaaagtggtcgtcactgtagtgctagaaaac
gccggcggtggttctagcaacggtgccccagtagtaaggaaaatttttgaccgagtcgtt
ctaggcccagaagaaattgagcctgaaaacaatgcgaagaaagaggtaaaacagtaa
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