Vibrio sp. STUT-A16: VspSTUT16_24340
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Entry
VspSTUT16_24340 CDS
T10420
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VspSTUT16_24340 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vis03400
]
VspSTUT16_24340 (xseB)
Enzymes [BR:
vis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
VspSTUT16_24340 (xseB)
DNA repair and recombination proteins [BR:
vis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
VspSTUT16_24340 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
COMM_domain
Vps53_N
LRIM1_dimer
Motif
Other DBs
NCBI-ProteinID:
BDR19088
LinkDB
All DBs
Position
1:2752931..2753173
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AA seq
80 aa
AA seq
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MAVKKPENMTFEATIEELDSLVDQLENGDLALDDALRKFERGIALARAGQTKLSDAEQRV
SILLSEDDEAPLSDFKPDSE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaagaaaccagaaaacatgaccttcgaagcaaccattgaagagcttgatagc
ttggttgatcaattagaaaatggcgatcttgccctagatgatgctctacgtaagtttgaa
cgaggcattgccttagctcgtgctggccaaactaaacttagcgacgccgaacagcgcgta
agtattcttctcagcgaagatgatgaagcaccactgagtgacttcaaaccagattcagaa
taa
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