Vibrio sp. STUT-A16: VspSTUT16_25950
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Entry
VspSTUT16_25950 CDS
T10420
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VspSTUT16_25950 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vis01007
]
VspSTUT16_25950 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vis03016
]
VspSTUT16_25950 (lysS)
Enzymes [BR:
vis01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
VspSTUT16_25950 (lysS)
Amino acid related enzymes [BR:
vis01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VspSTUT16_25950 (lysS)
Transfer RNA biogenesis [BR:
vis03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VspSTUT16_25950 (lysS)
Prokaryotic type
Other AARSs
VspSTUT16_25950 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BDR19249
LinkDB
All DBs
Position
1:complement(2939146..2940663)
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AA seq
505 aa
AA seq
DB search
MTDAVQNETVLEENKLIAERRAKLDEIRKSCKANGHPNDFRRDALAGDLQKEFGEKTKEE
LEELNHVVAIAGRIMAKRGPFLVIQETSGRIQAYAAKDVQKELKEKYQGLDIGDIIGVKG
ALHKSGKGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRKAFIV
RSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKR
LVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVAQEVL
GSTSMPYGDETVEFGGTYTRMSMFEAIKQYNPDHAQIQALTEEDLQNRELMVSIAKSVHV
EVEDFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGG
REVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGID
RLVMLLTNTHTIRDVILFPAMRPQA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgctgttcaaaacgaaactgtactagaagaaaataagctgattgctgaacgc
cgcgctaaactggatgaaatccgaaagagctgcaaagcaaacggccacccaaacgacttc
cgtcgtgacgcactagcgggcgaccttcaaaaagagttcggtgaaaagacgaaggaagag
ctagaagagcttaaccacgtggttgcaattgctggccgtattatggctaagcgtggtcca
ttcctagtaattcaagaaacatctggccgtatccaagcttacgctgctaaagacgtacaa
aaagagctaaaagagaaataccaaggtcttgatatcggtgacatcatcggtgttaaaggt
gcgctgcacaaatctggtaagggtgacctatacgtgaacatggaagaatacgagttgcta
actaaagcacttcgtccacttcctgagaagttccacggtcttactgaccaagaaatgcgt
taccgtcagcgttacgttgatctgattgtgaacgaagattcacgtaaagcatttattgta
cgttctaaagtaatgtctgcaattcgtaacttcatgatctcaaaacagttcatggaagta
gaaacgccgatgatgcacgtgatccctggtggtgcaagtgcacgcccattcatcacgcat
cacaacgcgctagacatgccaatgtacctacgtattgcacctgagttgtacctgaagcgt
ctagtggttggtggcttcgatcgcgtattcgaaattaaccgtaacttccgtaacgaaggt
ctttctccacgtcataacccagaattcactatgatggaattctacatggcgtacgcggat
tacaaagatctgatggactttactgaagaactactaagctcggtagcgcaagaagttcta
ggttcaacatcaatgccttacggtgatgaaacggttgaatttggtggcacttacactcgt
atgagcatgtttgaagcaatcaagcagtacaacccagatcacgcgcaaatccaagcgcta
accgaagaagatctacaaaaccgtgaactgatggtttctatcgcgaaatcagtacatgtt
gaagtagaagacttctggacatgtggtcagcttctagaagaaatcttcggtgaaacagca
gaacctaagctaatgcagccaacgttcatcactggctacccagcggacatctctccactg
gctcgccgtagcgatgacaacccgttctttacagaccgctttgaatttttcatcggcggt
cgtgaagtagcgaatggcttctcagagcttaacgatgcagaagatcaagacgcgcgcttt
aaagcacaggttgaagctaaagagtctggtgatgacgaagctatgttctacgatgcagat
tacatcactgcactagagcacggcctaccaccaacggcaggtcaaggtatcggtatcgac
cgtctggttatgctactgactaacacgcacactatccgtgacgtgatcctattcccagca
atgcgcccacaagcgtaa
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