Vibrio sp. STUT-A16: VspSTUT16_26530
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Entry
VspSTUT16_26530 CDS
T10420
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00470
D-Amino acid metabolism
vis00550
Peptidoglycan biosynthesis
vis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VspSTUT16_26530 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VspSTUT16_26530 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vis01011
]
VspSTUT16_26530 (murD)
Enzymes [BR:
vis01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VspSTUT16_26530 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vis01011
]
Precursor biosynthesis
Amino acid ligase
VspSTUT16_26530 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_9
Thi4
NAD_binding_7
TrkA_N
DAO
Motif
Other DBs
NCBI-ProteinID:
BDR19307
LinkDB
All DBs
Position
1:complement(3011508..3012821)
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AA seq
437 aa
AA seq
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MERWQNIHSVVVVGLGITGLSVVKHLRKNQPQLVVKVIDTRVNPPGAERLPEDVQLHSGG
WNTDWLSDADLIVTNPGIALATPEIQAVLEKGTTVVGDIELFAWAVQKPVIAITGSNGKS
TVTDLTGVMAKAAGLDVGVGGNIGVPALDLLEHDADLYVLELSSFQLETTSSLKLKAAAF
LNLSEDHMDRYQGMSDYRQAKLRIFDHADLAVVNRDDQETFPDAEMPLVTFGSDNQDFGL
EVDGNRTWLLDHGQRVVASDELKLVGKHNLSNALVVLALLKAAGVDYHNALNALKNYTGL
THRCQVVADNQGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGGVGKGADFSPLKPIF
ATLNLQLCCFGVDGDEFMPLHESAIRFDTMEDVIQQVSSQLKPGDMVMLSPACASFDQFD
NFMARGDAFAALAQKYA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttggcaaaacatacatagtgttgtcgtcgtagggctcggtattaccgggctc
tctgtcgttaaacacctaagaaaaaatcagccacagcttgtggtcaaagtcattgatact
cgcgtaaaccctccgggggcagagcgcttgccggaagatgttcaactgcatagtggtggt
tggaatacagactggctttctgacgctgatcttatcgtgaccaaccctggtattgcgcta
gcgacaccagagatccaagccgtattggaaaaaggcacgacagtagttggtgatattgag
ttattcgcctgggcggtgcagaagcctgtgattgcgattacgggctcaaacggtaagagc
actgtcaccgatctcacaggcgtgatggccaaggccgcgggtttggatgttggcgttggc
ggcaatatcggcgttcctgccttggatttactagaacatgacgcagacctatatgtgctt
gaactctcaagcttccagttggaaacaacgtcaagcttaaagctcaaagccgctgcgttt
ctgaatctttctgaagatcatatggaccgttatcaaggcatgtctgactatcgacaagcc
aagttgcgtatttttgatcatgctgatctcgcggtagtgaaccgtgatgatcaagaaacc
ttccctgatgcagagatgccattggtgacatttggcagcgacaatcaggactttggtctc
gaggtggatggcaatcgcacttggctgctcgatcacggtcaacgagtcgtcgcaagtgat
gagcttaagttggttggtaaacacaacttatccaatgcattggtcgttttagcgctctta
aaggctgcgggcgttgattatcacaacgcattgaatgcacttaaaaattacacgggactg
acacaccgatgccaggtggttgcggataatcaaggcgtaaaatgggtgaatgactctaaa
gcaactaatattgcgagcactatggctgcgctatctggtttggagtcgacaggtaagctc
tacttgctcgttggtggtgttggcaaaggtgctgacttctcgccattaaaaccgatcttc
gcaacgcttaacttgcagctgtgttgctttggcgttgatggcgatgaatttatgccacta
catgaatctgcaatacgtttcgacaccatggaagatgtgattcaacaagtatcttcgcag
ttaaaaccaggtgatatggtgatgctgtctcctgcatgtgctagctttgatcaattcgac
aactttatggcaagaggtgatgctttcgctgctcttgctcagaaatatgcataa
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